RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 PRODHO43272 600 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 RGS10O43665 173 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 AHCYL1O43865 530 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 SLC16A7O60669 478 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 KRT33AO76009 404 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 HLA-HP01893 362 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 TFP02787 698 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 GYPBP06028 91 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 CELA3BP08861 270 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 MMP7P09237 267 aaPredicted RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 SMIM18P0DKX4 95 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 PRR23D2P0DMB1 279 aaPredicted RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 PIPP12273 146 aaPredicted RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 ATP6V1B1P15313 513 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 CRYGSP22914 178 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 IL32P24001 234 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 PYCR1P32322 319 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 KIR2DL3P43628 341 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 SLC15A1P46059 708 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 RPL5P46777 297 aaKnown RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 CDH15P55291 814 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 MRPS34P82930 218 aaKnown RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 APOFQ13790 326 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 NXNL2Q5VZ03 156 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 ZNF813Q6ZN06 617 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 CXXC5Q7LFL8 322 aaKnown RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 BCDIN3DQ7Z5W3 292 aaKnown RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 JAZF1Q86VZ6 243 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 ZNF584Q8IVC4 421 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 GID4Q8IVV7 300 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 SLC22A24Q8N4F4 322 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 OR9Q1Q8NGQ5 310 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 FBXO17Q96EF6 278 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 DACH2Q96NX9 599 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 AMBNQ9NP70 447 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 RPRD1BQ9NQG5 326 aaKnown RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 MRPS18AQ9NVS2 196 aaKnown RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 MRPL22Q9NWU5 206 aaKnown RBP11.33□□□□□ -0.6
CCDC42-202ENST00000539522 DNAJC27Q9NZQ0 273 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 ERVK-18Q9QC07 812 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 PKDREJQ9NTG1 2253 aa11.33□□□□□ -0.6
CCDC42-202ENST00000539522 CIB4A0PJX0 185 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 DPRXA6NFQ7 191 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 EPXP11678 715 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 NR2C1P13056 603 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 SLC2A5P22732 501 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 SH3BGRP55822 239 aaPredicted RBP11.32□□□□□ -0.6
CCDC42-202ENST00000539522 ST3GAL4Q11206 333 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 MEP1BQ16820 701 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 OR7E24Q6IFN5 339 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 PLBD1Q6P4A8 553 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 MEPCEQ7L2J0 689 aaKnown RBP11.32□□□□□ -0.6
CCDC42-202ENST00000539522 PRSS48Q7RTY5 328 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 ABHD12BQ7Z5M8 362 aaPredicted RBP11.32□□□□□ -0.6
CCDC42-202ENST00000539522 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 STX19Q8N4C7 294 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 C17orf78Q8N4C9 275 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 OR51L1Q8NGJ5 315 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 FNDC8Q8TC99 324 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 RBP7Q96R05 134 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 COPS4Q9BT78 406 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 C1QTNF6Q9BXI9 259 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 SRA1Q9HD15 236 aaKnown RBP11.32□□□□□ -0.6
CCDC42-202ENST00000539522 VCX3AQ9NNX9 186 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 EMC7Q9NPA0 242 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 B3GAT2Q9NPZ5 323 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 POLE4Q9NR33 117 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 CRNNQ9UBG3 495 aaPredicted RBP11.32□□□□□ -0.6
CCDC42-202ENST00000539522 WARS2Q9UGM6 360 aaKnown RBP11.32□□□□□ -0.6
CCDC42-202ENST00000539522 PCDHGB1Q9Y5G3 927 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 PDZD2O15018 2839 aa11.32□□□□□ -0.6
CCDC42-202ENST00000539522 CCDC182A6NF36 153 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 RENP00797 406 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 IGLV1-44P01699 117 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 TFAP2AP05549 437 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 CDK1P06493 297 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 DBTP11182 482 aaKnown RBP11.31□□□□□ -0.6
CCDC42-202ENST00000539522 PPP3CBP16298 524 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 JUNBP17275 347 aaPredicted RBP11.31□□□□□ -0.6
CCDC42-202ENST00000539522 SPI1P17947 270 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 LAP3P28838 519 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 HTR1FP30939 366 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 MTNR1AP48039 350 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 SLC25A1P53007 311 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 NUDT6P53370 316 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 KRTAP10-9P60411 292 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 SPOCK1Q08629 439 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 DAZAP2Q15038 168 aaPredicted RBP11.31□□□□□ -0.6
CCDC42-202ENST00000539522 PPA1Q15181 289 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 KCNMB1Q16558 191 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 NRN1LQ496H8 165 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 FAM27BQ5VT28 67 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 B3GLCTQ6Y288 498 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 AHSA2Q719I0 299 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 MDP1Q86V88 176 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 WFDC8Q8IUA0 241 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 SVOPQ8N4V2 548 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 SLC26A10Q8NG04 563 aa11.31□□□□□ -0.6
CCDC42-202ENST00000539522 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
CCDC42-202ENST00000539522 FAM222BQ8WU58 562 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms