RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 TRIM64BA6NI03 449 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 J3QW42 95 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 SYNGR3O43761 229 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 CCNB2O95067 398 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 TP53P04637 393 aaPredicted RBP8.46□□□□□ -1.06
NUP98-220ENST00000533346 SCG5P05408 212 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 STOMP27105 288 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 APLNRP35414 380 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 NUDT6P53370 316 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 LOXL1Q08397 574 aaPredicted RBP8.46□□□□□ -1.06
NUP98-220ENST00000533346 SCRN3Q0VDG4 424 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 AQP6Q13520 282 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 SGCAQ16586 387 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 MSMPQ1L6U9 139 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 KRT80Q6KB66 452 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 DNM1P34Q6PK57 102 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 GLB1L2Q8IW92 636 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 LNX2Q8N448 690 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 FANK1Q8TC84 345 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 C10orf105Q8TEF2 133 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 CANT1Q8WVQ1 401 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 NSMAFQ92636 917 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 RASD2Q96D21 266 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 DUS3LQ96G46 650 aaKnown RBP8.46□□□□□ -1.06
NUP98-220ENST00000533346 ERMAPQ96PL5 475 aaPredicted RBP8.46□□□□□ -1.06
NUP98-220ENST00000533346 SORCS2Q96PQ0 1159 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 RHNO1Q9BSD3 238 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 ZNF416Q9BWM5 594 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 CHID1Q9BWS9 393 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 CADM1Q9BY67 442 aaKnown RBP8.46□□□□□ -1.06
NUP98-220ENST00000533346 MRPL37Q9BZE1 423 aaKnown RBP8.46□□□□□ -1.06
NUP98-220ENST00000533346 NUAK2Q9H093 628 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 WNT5BQ9H1J7 359 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 SYT4Q9H2B2 425 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 REEP1Q9H902 201 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 CDH20Q9HBT6 801 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 TBCCD1Q9NVR7 557 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 NKIRAS2Q9NYR9 191 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 NDRG4Q9ULP0 352 aaKnown RBP8.46□□□□□ -1.06
NUP98-220ENST00000533346 B9D1Q9UPM9 204 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 BAIAP2Q9UQB8 552 aa8.46□□□□□ -1.06
NUP98-220ENST00000533346 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.06
NUP98-220ENST00000533346 LOC100509620A0A075B734 347 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 LOC390937A0A1W2PQ73 354 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 SOCS2O14508 198 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 SSX4O60224 188 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 SLC16A7O60669 478 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 PPP1R3DO95685 299 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 IGHV3-13P01766 116 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 GAAP10253 952 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 HIST1H1CP16403 213 aaKnown RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 GIFP27352 417 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 MRPS11P82912 194 aaKnown RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 HSF2Q03933 536 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 KRTAP1-1Q07627 177 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 MOGQ16653 247 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 MBNL2Q5VZF2 373 aaKnown RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 RGS7BPQ6MZT1 257 aaPredicted RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 CLEC2AQ6UVW9 174 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 OR6V1Q8N148 313 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 PAQR4Q8N4S7 273 aaPredicted RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 NPEPL1Q8NDH3 523 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 HTRA1Q92743 480 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 NRBF2Q96F24 287 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 SAMD8Q96LT4 415 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 DCLRE1CQ96SD1 692 aaKnown RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 GSX1Q9H4S2 264 aaPredicted RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 YY1AP1Q9H869 796 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 VNN3Q9NY84 501 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 KCNG2Q9UJ96 466 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 KLHL21Q9UJP4 597 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 COA3Q9Y2R0 106 aaPredicted RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 SAMHD1Q9Y3Z3 626 aaKnown RBP8.45□□□□□ -1.06
NUP98-220ENST00000533346 ACANP16112 2415 aa8.45□□□□□ -1.06
NUP98-220ENST00000533346 MAP1AP78559 2803 aaPredicted RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 IGHV4-30-2A0A087WSY4 118 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 A0A1W2PPL8 197 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 OR6C68A6NDL8 312 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 OR6C6A6NF89 314 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 H7C1C5 153 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 DCTN6O00399 190 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 GPRIN2O60269 458 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 LY6G6DO95868 133 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 RENP00797 406 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 CST1P01037 141 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 ERCC1P07992 297 aaPredicted RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 ADH4P08319 380 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 APEX1P27695 318 aaKnown RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 LIPAP38571 399 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 CENPAP49450 140 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 GDI2P50395 445 aaKnown RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 PDLIM4P50479 330 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 LCN6P62502 163 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 GLO1Q04760 184 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 FLOT2Q14254 428 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 PCK2Q16822 640 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 KRTAP27-1Q3LI81 207 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 FAM209AQ5JX71 171 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 VHLLQ6RSH7 139 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 ARL9Q6T311 187 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms