RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 M0R129 80 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 CLIC3O95833 236 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 CST2P09228 141 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 GNAO1P09471 354 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 CLUP10909 449 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 IL32P24001 234 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 CDH11P55287 796 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 CSNK2BP67870 215 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 SRSF1Q07955 248 aaKnown RBP eCLIP10.95□□□□□ -0.66
COPB1-208ENST00000532088 FAM27E3Q08E93 113 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 APOFQ13790 326 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 PCK2Q16822 640 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 SHISA2Q6UWI4 295 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 SLC22A24Q8N4F4 322 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 FAM169BQ8N8A8 192 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 APH1BQ8WW43 257 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 OTULINQ96BN8 352 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 MNTQ99583 582 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 OR51V1Q9H2C8 321 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 MED20Q9H944 212 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 SLC17A5Q9NRA2 495 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 MRPS18AQ9NVS2 196 aaKnown RBP10.95□□□□□ -0.66
COPB1-208ENST00000532088 FBXL3Q9UKT7 428 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 AMDHD2Q9Y303 409 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 LRRC42Q9Y546 428 aa10.95□□□□□ -0.66
COPB1-208ENST00000532088 A0A1W2PPL8 197 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 C12orf71A8MTZ7 269 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 ENTPD6O75354 484 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 WBP4O75554 376 aaKnown RBP10.94□□□□□ -0.66
COPB1-208ENST00000532088 RAD51DO75771 328 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 LYZL6O75951 148 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 UBL3O95164 117 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 GYPBP06028 91 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 HOXC12P31275 282 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 PYCR1P32322 319 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 FOXG1P55316 489 aaPredicted RBP10.94□□□□□ -0.66
COPB1-208ENST00000532088 PCBD1P61457 104 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 RPS7P62081 194 aaKnown RBP10.94□□□□□ -0.66
COPB1-208ENST00000532088 CDK5R2Q13319 367 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 AQP6Q13520 282 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 CDSNQ15517 529 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 C3orf36Q3SXR2 165 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 TBRG1Q3YBR2 411 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 KLHL12Q53G59 568 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 TIGD4Q8IY51 512 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 BBS1Q8NFJ9 593 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 OR6K6Q8NGW6 343 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 ZNRF4Q8WWF5 429 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 C11orf40Q8WZ69 217 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 HSD17B8Q92506 261 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 UBE2FQ969M7 185 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 KCNN2Q9H2S1 579 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 SEC61A2Q9H9S3 476 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 RASSF1Q9NS23 344 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 PLCXD1Q9NUJ7 323 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 RPL36Q9Y3U8 105 aaKnown RBP10.94□□□□□ -0.66
COPB1-208ENST00000532088 RELNP78509 3460 aa10.94□□□□□ -0.66
COPB1-208ENST00000532088 IRGMA1A4Y4 181 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 TMCC2O75069 709 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 WNT11O96014 354 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 HLA-DQA2P01906 255 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 TFP02787 698 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 B4GALT1P15291 398 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 ZNF823P16415 610 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 CCKARP32238 428 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 CDAP32320 146 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 MTNR1AP48039 350 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 ENTPD1P49961 510 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 UBE2NP61088 152 aaKnown RBP10.93□□□□□ -0.66
COPB1-208ENST00000532088 ENDOGQ14249 297 aaKnown RBP10.93□□□□□ -0.66
COPB1-208ENST00000532088 SGCAQ16586 387 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 SLC36A2Q495M3 483 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 C9orf135Q5VTT2 229 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 KLHL24Q6TFL4 600 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 SHFQ7M4L6 423 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 SLC16A14Q7RTX9 510 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 ACBD4Q8NC06 268 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 OR10H5Q8NGA6 315 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 INTS14Q96SY0 518 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 YIPF3Q9GZM5 350 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 ACTR6Q9GZN1 396 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 RERGLQ9H628 205 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 MRPL22Q9NWU5 206 aaKnown RBP10.93□□□□□ -0.66
COPB1-208ENST00000532088 DNAJC27Q9NZQ0 273 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 NDRG3Q9UGV2 375 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 CYB5R1Q9UHQ9 305 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 ATPIF1Q9UII2 106 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 PCDHGB1Q9Y5G3 927 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 COMMD3-BMI1R4GMX3 469 aa10.93□□□□□ -0.66
COPB1-208ENST00000532088 PYCARD-AS1I3L0S3 204 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 SCG5P05408 212 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 MMP7P09237 267 aaPredicted RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 CCDC159P0C7I6 412 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 DBTP11182 482 aaKnown RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 PIPP12273 146 aaPredicted RBP10.92□□□□□ -0.66
COPB1-208ENST00000532088 IGFBP2P18065 325 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 ARR3P36575 388 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 SLC15A1P46059 708 aa10.92□□□□□ -0.66
COPB1-208ENST00000532088 HIST1H3AP68431 136 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms