RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, human

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX25-206	ENST00000513433	PMS2P2	O95744	297 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	THY1	P04216	161 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	FABP3	P05413	133 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TPO	P07202	933 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	HOXD4	P09016	255 aa	Predicted RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	UMPS	P11172	480 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ITGA2	P17301	1181 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	IL11	P20809	199 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ANOS1	P23352	680 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	SHC1	P29353	583 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	RBM34	P42696	430 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	OR1E2	P47887	323 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	UQCRFS1	P47985	274 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	GLIPR1	P48060	266 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	CASP6	P55212	293 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	CLDN15	P56746	228 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	CLDN20	P56880	219 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TAS2R41	P59536	307 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	RPS3A	P61247	264 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	CSNK2A1	P68400	391 aa	Predicted RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	HOXC5	Q00444	222 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	MYBPH	Q13203	477 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	DGCR6	Q14129	220 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	GK3P	Q14409	553 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ESPL1	Q14674	2120 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	OR1Q1	Q15612	314 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	IGFBP7	Q16270	282 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ZNF239	Q16600	458 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	GXYLT1	Q4G148	440 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	IQCC	Q4KMZ1	466 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	FAM98B	Q52LJ0	330 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	FAM69A	Q5T7M9	428 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	WDR88	Q6ZMY6	472 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TSEN54	Q7Z6J9	526 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	CYP4Z1	Q86W10	505 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	MED12L	Q86YW9	2145 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	RBM45	Q8IUH3	476 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	OR5M1	Q8NGP8	315 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	OR10Q1	Q8NGQ4	319 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	OR10D3	Q8NH80	312 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ZPLD1	Q8TCW7	415 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	RNF128	Q8TEB7	428 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	CPNE4	Q96A23	557 aa	Predicted RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TMEM18	Q96B42	140 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	DDIT4L	Q96D03	193 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	SLC47A1	Q96FL8	570 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	SLC41A3	Q96GZ6	507 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	PYURF	Q96I23	114 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	MPP4	Q96JB8	637 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ZFP3	Q96NJ6	502 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ZNF300	Q96RE9	604 aa	Predicted RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	PIP5K1A	Q99755	562 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TMEM43	Q9BTV4	400 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	SLC19A3	Q9BZV2	496 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TMEM185B	Q9H7F4	350 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TMEM27	Q9HBJ8	222 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	SDF2L1	Q9HCN8	221 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	PNPLA3	Q9NST1	481 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	MAN2C1	Q9NTJ4	1040 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	NDUFAF4	Q9P032	175 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	RPS6KB2	Q9UBS0	482 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TINAG	Q9UJW2	476 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	SLC7A7	Q9UM01	511 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	A4GNT	Q9UNA3	340 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TMED7	Q9Y3B3	224 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	HDGFL3	Q9Y3E1	203 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ZNF175	Q9Y473	711 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	FAM215A	Q9Y5M1	114 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	ENPP4	Q9Y6X5	453 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433		V9GYQ6	96 aa		4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	FBN1	P35555	2871 aa	Known RBP	4.17	□□□□□ -1.74
SNX25-206	ENST00000513433	TRAV36DV7	A0A075B6V5	113 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433		A0A0J9YW62	118 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433		A0A1W2PNV4	684 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	HTR3E	A5X5Y0	456 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	MAGEA13P	A6NCF6	341 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	LIPT2	A6NK58	231 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	SLC22A20	A6NK97	555 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	FTCDNL1	E5RQL4	147 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433		H0YC42	278 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	hCG_2039718	K7EN88	272 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	TNFSF11	O14788	317 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	HNRNPR	O43390	633 aa	Known RBP	4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	OR2T1	O43869	369 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	AHSA1	O95433	338 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	MT-ATP6	P00846	226 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	CXCR1	P25024	350 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	IFNA8	P32881	189 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	SFTPD	P35247	375 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	TIMP3	P35625	211 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	STAR	P49675	285 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	SUCLG1	P53597	346 aa	Known RBP	4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	TPD52	P55327	224 aa	Predicted RBP	4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	ACTR3	P61158	418 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	H3F3A	P84243	136 aa		4.16	□□□□□ -1.74
SNX25-206	ENST00000513433	CHRNB3	Q05901	458 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms