RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 LOXL1Q08397 574 aaPredicted RBP2.04□□□□□ -2.08
SMC4-223ENST00000493695 SYCNQ0VAF6 134 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 ERCC8Q13216 396 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 PPP1R7Q15435 360 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 CCNJQ5T5M9 372 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 RAET1LQ5VY80 246 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 CEMP1Q6PRD7 247 aaPredicted RBP2.04□□□□□ -2.08
SMC4-223ENST00000493695 UBALD2Q8IYN6 164 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 OR4C5Q8NGB2 326 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 RNF139Q8WU17 664 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 KIFAP3Q92845 792 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 MRGPRFQ96AM1 343 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 CCDC126Q96EE4 140 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 ZNF578Q96N58 590 aaPredicted RBP2.04□□□□□ -2.08
SMC4-223ENST00000493695 SERPINB12Q96P63 405 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 SPIN2AQ99865 258 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 SPIN2BQ9BPZ2 258 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 CCDC77Q9BR77 488 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 NUP58Q9BVL2 599 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 SLC25A2Q9BXI2 301 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 C12orf10Q9HB07 376 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.04□□□□□ -2.08
SMC4-223ENST00000493695 GPATCH2LQ9NWQ4 482 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 NMRK1Q9NWW6 199 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 ZNF835Q9Y2P0 537 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 IGLV1-36A0A0B4J1U3 117 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 A0A0U1RQV1 116 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 CIB4A0PJX0 185 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 FAM47DPA6NHR8 397 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 CCDC169A6NNP5 214 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 PPP1R2P9O14990 202 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 CLOCKO15516 846 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 KLHL41O60662 606 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 SERPINA5P05154 406 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 FABP3P05413 133 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 MRPL3P09001 348 aaKnown RBP2.03□□□□□ -2.08
SMC4-223ENST00000493695 PABPC4LP0CB38 370 aaKnown RBP2.03□□□□□ -2.08
SMC4-223ENST00000493695 OR5H8P0DN80 308 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 TROVE2P10155 538 aaKnown RBP eCLIP2.03□□□□□ -2.08
SMC4-223ENST00000493695 RAB3BP20337 219 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 CEACAM6P40199 344 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 ARG2P78540 354 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 TWF1Q12792 350 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 TCP10Q12799 353 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 SRSF5Q13243 272 aaKnown RBP2.03□□□□□ -2.08
SMC4-223ENST00000493695 MAB21L1Q13394 359 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 ZNF726P1Q15940 193 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 PGGHGQ32M88 737 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 ARMC12Q5T9G4 340 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 DNAJC24Q6P3W2 148 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 ARL9Q6T311 187 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 METAP1DQ6UB28 335 aaPredicted RBP2.03□□□□□ -2.08
SMC4-223ENST00000493695 NCCRP1Q6ZVX7 275 aaPredicted RBP2.03□□□□□ -2.08
SMC4-223ENST00000493695 BHLHA15Q7RTS1 189 aaPredicted RBP2.03□□□□□ -2.08
SMC4-223ENST00000493695 OAFQ86UD1 273 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 IQCKQ8N0W5 287 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 PRELID2Q8N945 189 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 OR2A1Q8NGT9 310 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 FRZBQ92765 325 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 N4BP2L2Q92802 583 aaPredicted RBP2.03□□□□□ -2.08
SMC4-223ENST00000493695 CNDP1Q96KN2 507 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 TGS1Q96RS0 853 aaKnown RBP2.03□□□□□ -2.08
SMC4-223ENST00000493695 SLC29A1Q99808 456 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 NDFIP1Q9BT67 221 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 SYNDIG1Q9H7V2 258 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 TMEM165Q9HC07 324 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 ZNF355PQ9NSJ1 428 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 LGALS13Q9UHV8 139 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 ZNF222Q9UK12 451 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 TMED5Q9Y3A6 229 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 GOLT1BQ9Y3E0 138 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 RFNGQ9Y644 331 aa2.03□□□□□ -2.08
SMC4-223ENST00000493695 TRBV9A0A0B4J1U6 114 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 C17orf51A8MQB3 221 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 C9JVG2 144 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 SIRPB1O00241 398 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 NDUFAB1O14561 156 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 GCM2O75603 506 aaPredicted RBP2.02□□□□□ -2.09
SMC4-223ENST00000493695 AQP8O94778 261 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 GABARAPO95166 117 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 IGKV1D-16P01601 117 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 HLA-DPB1P04440 258 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 ZNF286BP0CG31 522 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 CALM1P0DP23 149 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 CALM2P0DP24 149 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 CALM3P0DP25 149 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 ZNF24P17028 368 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 GINS1Q14691 196 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 OR7A5Q15622 319 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 STK11Q15831 433 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 ZSCAN26Q16670 478 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 ABCA11PQ4W5N1 156 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 THEM4Q5T1C6 240 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 CCDC183Q5T5S1 534 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 LRRC66Q68CR7 880 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 SLC25A34Q6PIV7 304 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 TMEM205Q6UW68 189 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 OR2L8Q8NGY9 312 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 ZNF502Q8TBZ5 544 aa2.02□□□□□ -2.09
SMC4-223ENST00000493695 SLC7A13Q8TCU3 470 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms