RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 E2F6O75461 281 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 TRMUO75648 421 aaKnown RBP12.3□□□□□ -0.44
ATG4B-218ENST00000479554 PTHP01270 115 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 FAM157BP0CG42 384 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 CCL2P13500 99 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 ITGA2P17301 1181 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 IL2RGP31785 369 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 IFNA8P32881 189 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 SELENOVP59797 346 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 PLP2Q04941 152 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 ST3GAL3Q11203 375 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 MED21Q13503 144 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 NKPD1Q17RQ9 610 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 TBC1D28Q2M2D7 210 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 ELFN2Q5R3F8 820 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 ZDHHC13Q8IUH4 622 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-218ENST00000479554 MOSPD2Q8NHP6 518 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 LIPHQ8WWY8 451 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 PRRC1Q96M27 445 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
ATG4B-218ENST00000479554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.29□□□□□ -0.448e-8■■■■■ 33.7
ATG4B-218ENST00000479554 ANK2Q01484 3957 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 NPIPB13A6NJU9 1138 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 NPIPB4C9JG80 1138 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 G3V2T6 193 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 EI24O14681 340 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 PIP5K1CO60331 668 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 SLC2A10O95528 541 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 SNAP29O95721 258 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 HPXP02790 462 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 LCKP06239 509 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 RPSAP08865 295 aaKnown RBP12.29□□□□□ -0.44
ATG4B-218ENST00000479554 TSPAN19P0C672 248 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 NR2C1P13056 603 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 ACHEP22303 614 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 THBS2P35442 1172 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 ZNF133P52736 654 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-218ENST00000479554 CD47Q08722 323 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 CR1LQ2VPA4 569 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 ALKBH6Q3KRA9 238 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 C10orf128Q5T292 105 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 ARMC4Q5T2S8 1044 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 UGT2A3Q6UWM9 527 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 LRRC18Q8N456 261 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 LINC01356Q8N9X3 169 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 OR1J2Q8NGS2 313 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 RDH5Q92781 318 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 NRBF2Q96F24 287 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 NR1H4Q96RI1 486 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-218ENST00000479554 OSBPL10Q9BXB5 764 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 KCNN2Q9H2S1 579 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 GPR160Q9UJ42 338 aa12.29□□□□□ -0.44
ATG4B-218ENST00000479554 MMP7P09237 267 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 NAT2P11245 290 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 IFI30P13284 250 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 APLNRP35414 380 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 GPR6P46095 362 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 ALDH3A2P51648 485 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 ARHGDIAP52565 204 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 CDH15P55291 814 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 KLF3P57682 345 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 MRPS34P82930 218 aaKnown RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 HSF2Q03933 536 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 FMODQ06828 376 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 TOP3AQ13472 1001 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 ALG10Q5BKT4 473 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 SHQ1Q6PI26 577 aaKnown RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 SYNPRQ8TBG9 265 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 SNX33Q8WV41 574 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 BPIFA2Q96DR5 249 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 RBM4BQ9BQ04 359 aaKnown RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 RBM4Q9BWF3 364 aaKnown RBP12.28□□□□□ -0.44
ATG4B-218ENST00000479554 TXNIPQ9H3M7 391 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 REEP1Q9H902 201 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 SIAEQ9HAT2 523 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 SMURF2Q9HAU4 748 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 CCNB1IP1Q9NPC3 277 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 USE1Q9NZ43 259 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 TAAR3PQ9P1P4 343 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 A4GNTQ9UNA3 340 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 HIF3AQ9Y2N7 669 aa12.28□□□□□ -0.44
ATG4B-218ENST00000479554 HTR3EA5X5Y0 456 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 NCR1O76036 304 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 CLPTM1O96005 669 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 IFNW1P05000 195 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 SAGP10523 405 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF250P15622 560 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 CDAP32320 146 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 RAD52P43351 418 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 UCP2P55851 309 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 ERVS71-1P61550 626 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 GK3PQ14409 553 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 PABPC1L2AQ5JQF8 200 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 TBPL2Q6SJ96 375 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 OFCC1Q8IZS5 231 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF519Q8TB69 540 aa12.27□□□□□ -0.45
ATG4B-218ENST00000479554 C11orf40Q8WZ69 217 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms