RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 PSORS1C2Q9UIG4 136 aa-0.72□□□□□ -2.52
CALD1-218ENST00000478075 COPS3Q9UNS2 423 aa-0.72□□□□□ -2.52
CALD1-218ENST00000478075 ASB3Q9Y575 518 aa-0.72□□□□□ -2.52
CALD1-218ENST00000478075 NCOR1O75376 2440 aa-0.72□□□□□ -2.52
CALD1-218ENST00000478075 KDM6BO15054 1643 aa-0.72□□□□□ -2.52
CALD1-218ENST00000478075 LOXHD1Q8IVV2 1947 aa-0.72□□□□□ -2.53
CALD1-218ENST00000478075 EML5Q05BV3 1969 aa-0.72□□□□□ -2.53
CALD1-218ENST00000478075 PXDNLA1KZ92 1463 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 RPRD2Q5VT52 1461 aaKnown RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 DENND4AQ7Z401 1863 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 CNTRLQ7Z7A1 2325 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 IGKV1-12A0A0C4DH73 117 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 PSMA7O14818 248 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 RS1O15537 224 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SHOX2O60902 331 aaPredicted RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 IGKV1D-12P01611 117 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 CT62P0C5K7 136 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 POLR2EP19388 210 aaKnown RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 PGCP20142 388 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SPRR2EP22531 72 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 F2RP25116 425 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 PRDX2P32119 198 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SSTR5P35346 364 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 CYLC1P35663 651 aaPredicted RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 PKNOX1P55347 436 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 IL5RAQ01344 420 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 TCP10Q12799 353 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 MRPL28Q13084 256 aaKnown RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 KRTAP6-2Q3LI66 62 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 FAM201AQ5SY85 155 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 LGALS9CQ6DKI2 356 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 DNAJC24Q6P3W2 148 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SHQ1Q6PI26 577 aaKnown RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 UTS2BQ765I0 119 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SCXQ7RTU7 201 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 PEX26Q7Z412 305 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SYCP3Q8IZU3 236 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 EXOC3-AS1Q8N2X6 119 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 FAM19A2Q8N3H0 131 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 C10orf126Q8N4M7 172 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 C2orf73Q8N5S3 287 aaPredicted RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 ZNF283Q8N7M2 679 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SNX31Q8N9S9 440 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SLC30A7Q8NEW0 376 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 NCLNQ969V3 563 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 ZNF707Q96C28 371 aaPredicted RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 VSTM2LQ96N03 204 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 BAG1Q99933 345 aaPredicted RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 TUBA4BQ9H853 241 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 FANCEQ9HB96 536 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 SLC38A10Q9HBR0 1119 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 TTLL3Q9Y4R7 772 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 NCOA6Q14686 2063 aaPredicted RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 PLEKHG2Q9H7P9 1386 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 FREM1Q5H8C1 2179 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 HECTD1Q9ULT8 2610 aa-0.73□□□□□ -2.53
CALD1-218ENST00000478075 NYNRINQ9P2P1 1898 aaKnown RBP-0.73□□□□□ -2.53
CALD1-218ENST00000478075 DCHS2Q6V1P9 2916 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 ERICH4A6NGS2 130 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 ZNF729A6NN14 1252 aaPredicted RBP-0.74□□□□□ -2.53
CALD1-218ENST00000478075 PRAMEF26H0Y7S4 382 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 SIVA1O15304 175 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 DKC1O60832 514 aaKnown RBP eCLIP-0.74□□□□□ -2.53
CALD1-218ENST00000478075 UPK3AO75631 287 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 CDS2O95674 445 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 RAB3DO95716 219 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 CA1P00915 261 aaPredicted RBP-0.74□□□□□ -2.53
CALD1-218ENST00000478075 APOA4P06727 396 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 SCG2P13521 617 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 CHMLP26374 656 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 AK4P27144 223 aaPredicted RBP-0.74□□□□□ -2.53
CALD1-218ENST00000478075 HLA-DMAP28067 261 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 GCAP28676 217 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 CEACAM6P40199 344 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 TMED10P49755 219 aaKnown RBP-0.74□□□□□ -2.53
CALD1-218ENST00000478075 UBE2E1P51965 193 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 HCCSP53701 268 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 ERVK-25P63136 954 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 PRR3P79522 188 aaKnown RBP-0.74□□□□□ -2.53
CALD1-218ENST00000478075 SNX1Q13596 522 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 OXA1LQ15070 435 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 RALBP1Q15311 655 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 SURF2Q15527 256 aaPredicted RBP-0.74□□□□□ -2.53
CALD1-218ENST00000478075 CST6Q15828 149 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 ZNF77Q15935 545 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 KLK9Q2XQG4 91 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 FBXL19-AS1Q494R0 122 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 ORMDL2Q53FV1 153 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 MPV17L2Q567V2 206 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 SPINK9Q5DT21 86 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 CNIH2Q6PI25 160 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 TMEM179Q6ZVK1 233 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 ZNF410Q86VK4 478 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 COA5Q86WW8 74 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 GTPBP8Q8N3Z3 284 aaPredicted RBP-0.74□□□□□ -2.53
CALD1-218ENST00000478075 DHRSXQ8N5I4 330 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 DENND6BQ8NEG7 585 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 STEAP2Q8NFT2 490 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 OR10A7Q8NGE5 316 aa-0.74□□□□□ -2.53
CALD1-218ENST00000478075 OR4K13Q8NH42 304 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms