RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 MROQ9BYG7 248 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 PRDM14Q9GZV8 571 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 KCNN2Q9H2S1 579 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 NELFAQ9H3P2 528 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 BCO1Q9HAY6 547 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 EMC7Q9NPA0 242 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 POLE4Q9NR33 117 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 PLSCR2Q9NRY7 297 aa12.15□□□□□ -0.46
TRAF4-210ENST00000475329 MRPL33O75394 65 aaKnown RBP12.14□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF254O75437 659 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 SERPINA3P01011 423 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 CRYABP02511 175 aaKnown RBP12.14□□□□□ -0.47
TRAF4-210ENST00000475329 MSR1P21757 451 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 LSM6P62312 80 aaKnown RBP12.14□□□□□ -0.47
TRAF4-210ENST00000475329 ALKBH1Q13686 389 aaKnown RBP12.14□□□□□ -0.47
TRAF4-210ENST00000475329 SGCAQ16586 387 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 ST3GAL2Q16842 350 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 RIPPLY2Q5TAB7 128 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF544Q6NX49 715 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 SPATC1Q76KD6 591 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 GHSRQ92847 366 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 RBM24Q9BX46 236 aaKnown RBP12.14□□□□□ -0.47
TRAF4-210ENST00000475329 HDHD5Q9BXW7 423 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 C1orf198Q9H425 327 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 SIAEQ9HAT2 523 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 ELOVL3Q9HB03 270 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 GP6Q9HCN6 339 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 PARPBPQ9NWS1 579 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 CYB5R1Q9UHQ9 305 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 TP53TG5Q9Y2B4 290 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 LRP12Q9Y561 859 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 LHFPL6Q9Y693 200 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 MED12LQ86YW9 2145 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 CACNA1CQ13936 2221 aa12.14□□□□□ -0.47
TRAF4-210ENST00000475329 NCOA6Q14686 2063 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-210ENST00000475329 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
TRAF4-210ENST00000475329 CD8B2A6NJW9 211 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 OR6C65A6NJZ3 312 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 CLPXO76031 633 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 WNT11O96014 354 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 YES1P07947 543 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 CD8BP10966 210 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 NTF4P34130 210 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 SOX6P35712 828 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 MRPS34P82930 218 aaKnown RBP12.13□□□□□ -0.47
TRAF4-210ENST00000475329 FDX2Q6P4F2 183 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 CORO6Q6QEF8 472 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 DEGS2Q6QHC5 323 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 PLXDC2Q6UX71 529 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 P4HA3Q7Z4N8 544 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 CPT1CQ8TCG5 803 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 RNF133Q8WVZ7 376 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 EXTL1Q92935 676 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 RNF166Q96A37 237 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-210ENST00000475329 SLAMF6Q96DU3 332 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 ABHD17AQ96GS6 310 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-210ENST00000475329 DCLRE1CQ96SD1 692 aaKnown RBP12.13□□□□□ -0.47
TRAF4-210ENST00000475329 LINC00470Q9BZP3 86 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 SLCO5A1Q9H2Y9 848 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 CALHM2Q9HA72 323 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 GALNT8Q9NY28 637 aa12.13□□□□□ -0.47
TRAF4-210ENST00000475329 GDF2Q9UK05 429 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-210ENST00000475329 OR14I1A6ND48 311 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 KRT33AO76009 404 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 IL1AP01583 271 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 H2BFMP0C1H6 154 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 NPR2P20594 1047 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 PAX7P23759 505 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 OPRL1P41146 370 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 NANOS3P60323 173 aaKnown RBP12.12□□□□□ -0.47
TRAF4-210ENST00000475329 CXADRP78310 365 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 STK11Q15831 433 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 PLEKHN1Q494U1 663 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-210ENST00000475329 OR7E24Q6IFN5 339 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 PAMR1Q6UXH9 720 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 TMEM91Q6ZNR0 172 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 TUSC5Q8IXB3 177 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 OR2G2Q8NGZ5 317 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 ABHD4Q8TB40 342 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 HSD17B8Q92506 261 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 NABP1Q96AH0 204 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 MAP6Q96JE9 813 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 C4orf45Q96LM5 186 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 DOCK7Q96N67 2140 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 MED18Q9BUE0 208 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 COMMD4Q9H0A8 199 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 CRLF2Q9HC73 371 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 GPR35Q9HC97 309 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 CLEC4AQ9UMR7 237 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF281Q9Y2X9 895 aa12.12□□□□□ -0.47
TRAF4-210ENST00000475329 A0A1B0GTH9 108 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 TMEM8BA6NDV4 472 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 TMEM212A6NML5 194 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF878C9JN71 531 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 CDRT1O95170 752 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 ROR2Q01974 943 aaKnown RBP12.11□□□□□ -0.47
TRAF4-210ENST00000475329 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms