RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 IDSB3KWA1 339 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 F8W036 122 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 PSMD9O00233 223 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 ZNF208O43345 1280 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 OR2T1O43869 369 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 DOK2O60496 412 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 NSA2O95478 260 aaKnown RBP5.53□□□□□ -1.52
HERC4-209ENST00000473533 IGHMP01871 453 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 S100A8P05109 93 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 ZBTB25P24278 435 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 RFC3P40938 356 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 ECI1P42126 302 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 PPICP45877 212 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 FNTBP49356 437 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 RAB13P51153 203 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 RAB5BP61020 215 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 RPL27P61353 136 aaKnown RBP5.53□□□□□ -1.52
HERC4-209ENST00000473533 B2MP61769 119 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 CXADRP78310 365 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 BTG2P78543 158 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 MEP1BQ16820 701 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 SCGB2B2Q4G0G5 96 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 LY6G6FQ5SQ64 297 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 AVPI1Q5T686 147 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 LSRQ86X29 649 aaPredicted RBP5.53□□□□□ -1.52
HERC4-209ENST00000473533 BAP18Q8IXM2 172 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 SLC30A7Q8NEW0 376 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 OR13C3Q8NGS6 347 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 PPP1R1CQ8WVI7 109 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 SLC25A44Q96H78 314 aaPredicted RBP5.53□□□□□ -1.52
HERC4-209ENST00000473533 TSPAN32Q96QS1 320 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 LPAR4Q99677 370 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 SYT4Q9H2B2 425 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 BARX1Q9HBU1 254 aaPredicted RBP5.53□□□□□ -1.52
HERC4-209ENST00000473533 ASF1BQ9NVP2 202 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 DNAJB11Q9UBS4 358 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 PCDHB10Q9UN67 800 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 GTF2A1LQ9UNN4 478 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 R4GMQ9 66 aa5.53□□□□□ -1.52
HERC4-209ENST00000473533 IGKV1D-42A0A075B6H8 117 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 LOC390937A0A1W2PQ73 354 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 A0A1W2PQD3 144 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 A6NCN8 305 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 F8VVB4 439 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 F8VWA3 439 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 RFXAPO00287 272 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 SLC31A1O15431 190 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 AKR7A3O95154 331 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 IGKV1D-16P01601 117 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 FCER2P06734 321 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 ITGA5P08648 1049 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 TMIGD3P0DMS9 266 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 GP1BBP13224 206 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 HSD11B1P28845 292 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 KIR3DL2P43630 455 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 GPR3P46089 330 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 SKP2Q13309 424 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 TDGQ13569 410 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CSRP2Q16527 193 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CDNFQ49AH0 187 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 MESTQ5EB52 335 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 RTL6Q6ICC9 239 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 PARGQ86W56 976 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CATSPERDQ86XM0 798 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 KDF1Q8NAX2 398 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 RELL2Q8NC24 303 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 OR1J2Q8NGS2 313 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 SLC39A7Q92504 469 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 RNF166Q96A37 237 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 C1QTNF6Q9BXI9 259 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 MS4A7Q9GZW8 240 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 CRISPLD2Q9H0B8 497 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 CCDC86Q9H6F5 360 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 CHMP1AQ9HD42 196 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 PRMT8Q9NR22 394 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 VSX1Q9NZR4 365 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 FBLN5Q9UBX5 448 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 KLHDC2Q9Y2U9 406 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 MMACHCQ9Y4U1 282 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 HS3ST3A1Q9Y663 406 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 NOTCH4Q99466 2003 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 TRBV6-7A0A0A0MS04 114 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 A0A1W2PPC1 479 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 C9orf170A2RU37 121 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 PRSS37A4D1T9 235 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 C5orf51A6NDU8 294 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 ZNF98A6NK75 572 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 STK17BO94768 372 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 DCNP07585 359 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 GSTP1P09211 210 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 SPARCP09486 303 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 IGFBP3P17936 291 aaPredicted RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 PAX6P26367 422 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 RABIFP47224 123 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 AKR1D1P51857 326 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 GPR85P60893 370 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 RPS15P62841 145 aaKnown RBP5.52□□□□□ -1.53
HERC4-209ENST00000473533 GUCA2AQ02747 115 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 MESP2Q0VG99 397 aa5.52□□□□□ -1.53
HERC4-209ENST00000473533 EIF3IQ13347 325 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms