RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CCDC22O60826 627 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 PRSS23O95084 383 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 SERPINA1P01009 418 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 MSR1P21757 451 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 RPL4P36578 427 aaKnown RBP19.18■□□□□ 0.66
C9orf3-213ENST00000471978 GPR4P46093 362 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 MMP15P51511 669 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 LCN6P62502 163 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 HFEQ30201 348 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 TMEM255AQ5JRV8 349 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 MBNL2Q5VZF2 373 aaKnown RBP19.18■□□□□ 0.66
C9orf3-213ENST00000471978 ZNF774Q6NX45 483 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 RFPL4BQ6ZWI9 263 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 C1orf174Q8IYL3 243 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 METTL17Q9H7H0 456 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-213ENST00000471978 ZNF665Q9H7R5 613 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 EFCAB1Q9HAE3 211 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 CACNG2Q9Y698 323 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 NBEAL1Q6ZS30 2694 aa19.18■□□□□ 0.66
C9orf3-213ENST00000471978 TRAV20A0A0B4J274 112 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 C12orf71A8MTZ7 269 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 CLDN25C9JDP6 229 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 CDC42EP2O14613 210 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 IGHV1-46P01743 117 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 ANPEPP15144 967 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 ITGA2P17301 1181 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 GSK3BP49841 420 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 PPP1CBP62140 327 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 ENDOGQ14249 297 aaKnown RBP19.17■□□□□ 0.66
C9orf3-213ENST00000471978 HSP90B2PQ58FF3 399 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 FAM209AQ5JX71 171 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 FAHD2BQ6P2I3 314 aaPredicted RBP19.17■□□□□ 0.66
C9orf3-213ENST00000471978 TMPRSS11FQ6ZWK6 438 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 RRM2BQ7LG56 351 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 ELMOD3Q96FG2 381 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 FAHD2AQ96GK7 314 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 OCEL1Q9H607 264 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 POLE4Q9NR33 117 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 GRHPRQ9UBQ7 328 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 ADAM18Q9Y3Q7 739 aa19.17■□□□□ 0.66
C9orf3-213ENST00000471978 ICMTO60725 284 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 NGFP01138 241 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 SCG5P05408 212 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 ZBED5Q49AG3 693 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 ACSM5Q6NUN0 579 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 C8orf82Q6P1X6 216 aaPredicted RBP19.16■□□□□ 0.66
C9orf3-213ENST00000471978 SHQ1Q6PI26 577 aaKnown RBP19.16■□□□□ 0.66
C9orf3-213ENST00000471978 SYT9Q86SS6 491 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 CYP4Z1Q86W10 505 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 FAM156AQ8NDB6 213 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 FAM162AQ96A26 154 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 C4orf45Q96LM5 186 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 NMNAT1Q9HAN9 279 aaPredicted RBP19.16■□□□□ 0.66
C9orf3-213ENST00000471978 ELOVL3Q9HB03 270 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 EMC7Q9NPA0 242 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 CYSLTR2Q9NS75 346 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 WIPI2Q9Y4P8 454 aa19.16■□□□□ 0.66
C9orf3-213ENST00000471978 ZSCAN5BA6NJL1 495 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 XKRYO14609 159 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 CD14P08571 375 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 LIPAP38571 399 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 MDH1P40925 334 aaKnown RBP19.15■□□□□ 0.66
C9orf3-213ENST00000471978 ARHGDIAP52565 204 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 ARL9Q6T311 187 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 TREML1Q86YW5 311 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 CCL17Q92583 94 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 RAB1CQ92928 201 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 RAB39BQ96DA2 213 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 TIMD4Q96H15 378 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 Q96M85 177 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 KCTD14Q9BQ13 255 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-213ENST00000471978 EGLN1Q9GZT9 426 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 ANKRD19PQ9H560 264 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 NDRG4Q9ULP0 352 aaKnown RBP19.15■□□□□ 0.66
C9orf3-213ENST00000471978 ENPP4Q9Y6X5 453 aa19.15■□□□□ 0.66
C9orf3-213ENST00000471978 H3BSA7 217 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 NDUFAB1O14561 156 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 MPZL1O95297 269 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 PNPP00491 289 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 NCK1P16333 377 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 ZNF26P17031 533 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-213ENST00000471978 NUDT2P50583 147 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 MESTQ5EB52 335 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 HACD2Q6Y1H2 254 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 WACQ9BTA9 647 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 NDEL1Q9GZM8 345 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 CGGBP1Q9UFW8 167 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-213ENST00000471978 TMEM5Q9Y2B1 443 aa19.14■□□□□ 0.65
C9orf3-213ENST00000471978 PLPP2O43688 288 aa19.13■□□□□ 0.65
C9orf3-213ENST00000471978 AHCYL1O43865 530 aa19.13■□□□□ 0.65
C9orf3-213ENST00000471978 DEAF1O75398 565 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-213ENST00000471978 IGHV2-5P01817 119 aa19.13■□□□□ 0.65
C9orf3-213ENST00000471978 SCGB2A2Q13296 93 aa19.13■□□□□ 0.65
C9orf3-213ENST00000471978 THSD4Q6ZMP0 1018 aa19.13■□□□□ 0.65
C9orf3-213ENST00000471978 TSEN54Q7Z6J9 526 aaKnown RBP19.13■□□□□ 0.65
C9orf3-213ENST00000471978 SLC7A13Q8TCU3 470 aa19.13■□□□□ 0.65
C9orf3-213ENST00000471978 FAM46AQ96IP4 442 aaKnown RBP19.13■□□□□ 0.65
C9orf3-213ENST00000471978 ZNF570Q96NI8 536 aa19.13■□□□□ 0.65
C9orf3-213ENST00000471978 G6PC2Q9NQR9 355 aa19.13■□□□□ 0.65
C9orf3-213ENST00000471978 KLHL21Q9UJP4 597 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms