RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 PCOTHQ58A44 107 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 OR2G2Q8NGZ5 317 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 CMTM2Q8TAZ6 248 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 N4BP2L2Q92802 583 aaPredicted RBP0.69□□□□□ -2.3
SSB-208ENST00000468600 PIK3IP1Q96FE7 263 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 GALNT14Q96FL9 552 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 RSG1Q9BU20 258 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 C21orf62Q9NYP8 219 aa0.69□□□□□ -2.3
SSB-208ENST00000468600 NOL7Q9UMY1 257 aaKnown RBP0.69□□□□□ -2.3
SSB-208ENST00000468600 ATP10AO60312 1499 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 IGHV1-3A0A0C4DH29 117 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 PRRG1O14668 218 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 OR7A10O76100 309 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 C2P06681 752 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 IFI30P13284 250 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 ZNF35P13682 527 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 CAMLGP49069 296 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 CCNA1P78396 465 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 CDH17Q12864 832 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 CLINT1Q14677 625 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 ZSCAN26Q16670 478 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 ENPP6Q6UWR7 440 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 TCF24Q7RTU0 167 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 ZSCAN30Q86W11 494 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 ZNF713Q8N859 430 aaPredicted RBP0.68□□□□□ -2.3
SSB-208ENST00000468600 CTNNBL1Q8WYA6 563 aaPredicted RBP0.68□□□□□ -2.3
SSB-208ENST00000468600 HSFY1Q96LI6 401 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 R4GN34 69 aa0.68□□□□□ -2.3
SSB-208ENST00000468600 LOXP28300 417 aaPredicted RBP0.67□□□□□ -2.3
SSB-208ENST00000468600 ATP5C1P36542 298 aaKnown RBP0.67□□□□□ -2.3
SSB-208ENST00000468600 VHLP40337 213 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 PRLHRP49683 370 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 UBE2NP61088 152 aaKnown RBP0.67□□□□□ -2.3
SSB-208ENST00000468600 WDR59Q6PJI9 974 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 TMEM123Q8N131 208 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 ANKFN1Q8N957 763 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 HSD17B11Q8NBQ5 300 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 OR10R2Q8NGX6 335 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 DUS3LQ96G46 650 aaKnown RBP0.67□□□□□ -2.3
SSB-208ENST00000468600 TTC25Q96NG3 672 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 PARD6BQ9BYG5 372 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 EDA2RQ9HAV5 297 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 ABCC9O60706 1549 aa0.67□□□□□ -2.3
SSB-208ENST00000468600 TRIM64A6NGJ6 449 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 FAM47DPA6NHR8 397 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 TRIM64BA6NI03 449 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 MFNGO00587 321 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 AIFM1O95831 613 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 HEXBP07686 556 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 UQCRFS1P1P0C7P4 283 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 FBXW4P57775 412 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 PPP1CBP62140 327 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 TEX30Q5JUR7 227 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 CCNJQ5T5M9 372 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 H3F3CQ6NXT2 135 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 METTL13Q8N6R0 699 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 MFSD9Q8NBP5 474 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 LY6G5BQ8NDX9 201 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 ZFP3Q96NJ6 502 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 RBBP8Q99708 897 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 SEC22CQ9BRL7 303 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 CHCHD7Q9BUK0 85 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 RAB18Q9NP72 206 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 NLE1Q9NVX2 485 aaPredicted RBP0.66□□□□□ -2.3
SSB-208ENST00000468600 SMOXQ9NWM0 555 aa0.66□□□□□ -2.3
SSB-208ENST00000468600 CHI3L1P36222 383 aaPredicted RBP0.65□□□□□ -2.31
SSB-208ENST00000468600 EPS15P42566 896 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 RGS4P49798 205 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 CDK5Q00535 292 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 INAQ16352 499 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 PTPN20Q4JDL3 420 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 SGPP2Q8IWX5 399 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 LRRC75AQ8NAA5 344 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 TRPV1Q8NER1 839 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.65□□□□□ -2.31
SSB-208ENST00000468600 SLC38A2Q96QD8 506 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 HSD17B10Q99714 261 aaKnown RBP0.65□□□□□ -2.31
SSB-208ENST00000468600 MCTS1Q9ULC4 181 aaKnown RBP0.65□□□□□ -2.31
SSB-208ENST00000468600 ZNF337Q9Y3M9 751 aa0.65□□□□□ -2.31
SSB-208ENST00000468600 CHTOPQ9Y3Y2 248 aaKnown RBP0.65□□□□□ -2.31
SSB-208ENST00000468600 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
SSB-208ENST00000468600 IGLV10-54A0A075B6I4 117 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 IGHV3-72A0A0B4J1Y9 119 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 MBLAC1A4D2B0 266 aaPredicted RBP0.64□□□□□ -2.31
SSB-208ENST00000468600 CEACAM18A8MTB9 384 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 CNMDO75829 334 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 ERLIN2O94905 339 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 AK1P00568 194 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 IGHV3-11P01762 117 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 IGLV7-43P04211 117 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 CTSLP07711 333 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 ZNF250P15622 560 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 NTF3P20783 257 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 GALR1P47211 349 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 DEFB103AP81534 67 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 TMEM69Q5SWH9 247 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 TTC23Q5W5X9 447 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 PRSS54Q6PEW0 395 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 ISLR2Q6UXK2 745 aa0.64□□□□□ -2.31
SSB-208ENST00000468600 LIX1Q8N485 282 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms