RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 A0A0G2JMP0 313 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 MBD3L4A6NDZ8 208 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 MBD3L3A6NE82 208 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 MBD3L5A6NJ08 208 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 RIIAD1A6NNX1 92 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 GPR171O14626 319 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 NUPL2O15504 423 aaKnown RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 TOXO94900 526 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 YES1P07947 543 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 MYF6P23409 242 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 EDNRAP25101 427 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 AGTR1P30556 359 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 PER3P56645 1201 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 EFNB1P98172 346 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 TLE1Q04724 770 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 CD47Q08722 323 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 IL18R1Q13478 541 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 YIF1BQ5BJH7 314 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 CARD17Q5XLA6 110 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 NIPAL3Q6P499 406 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 SPATC1Q76KD6 591 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 SLC37A3Q8NCC5 494 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 NPEPL1Q8NDH3 523 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 OR8J1Q8NGP2 316 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 OR6X1Q8NH79 312 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 MBD3L2Q8NHZ7 208 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 ZNF566Q969W8 418 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 OTULINQ96BN8 352 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 SLC25A44Q96H78 314 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 KCNK17Q96T54 332 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 SYT4Q9H2B2 425 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 FN3KQ9H479 309 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 HMG20AQ9NP66 347 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 HINT3Q9NQE9 182 aaKnown RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 ZNF226Q9NYT6 803 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 GLTPQ9NZD2 209 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 SPTBN1Q01082 2364 aaKnown RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 A0A0X1KG70 313 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 PRSS37A4D1T9 235 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 OR6C68A6NDL8 312 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 ZNF726A6NNF4 738 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 POM121CA8CG34 1229 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 ZNF724A8MTY0 619 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 LEUTXA8MZ59 168 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 H3BMQ9 156 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 CLPXO76031 633 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 ZNF432O94892 652 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 IFNGP01579 166 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 IGHG1P01857 330 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 HOXD4P09016 255 aaPredicted RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 PGA4P0DJD7 388 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 PGA3P0DJD8 388 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 CLUP10909 449 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 GABRB1P18505 474 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 FOXF2Q12947 444 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 TMEM201Q5SNT2 666 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 NUFIP2Q7Z417 695 aaKnown RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 CDH24Q86UP0 819 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 NAXEQ8NCW5 288 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 SETD9Q8NE22 299 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 CNIH3Q8TBE1 160 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 TMEM163Q8TC26 289 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 APH1BQ8WW43 257 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 LRR1Q96L50 414 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 ADAD1Q96M93 576 aaKnown RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 TSSK2Q96PF2 358 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 OR2M2Q96R28 347 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 TTYH2Q9BSA4 534 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 HCAR1Q9BXC0 346 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 MRPL13Q9BYD1 178 aaKnown RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 PPA2Q9H2U2 334 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 MED20Q9H944 212 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 KLHL21Q9UJP4 597 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 A0A0A6YYJ9 748 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 TRGV8A0A0C4DH27 118 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 A0A1W2PPW3 197 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 LOC390937A0A1W2PQ73 354 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 A6NIZ1 184 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 DCTN6O00399 190 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 AKAP8O43823 692 aaKnown RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 SS18L1O75177 396 aaPredicted RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 MRPL33O75394 65 aaKnown RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 BPNT1O95861 308 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 IL2RAP01589 272 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 GYPBP06028 91 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 RAB3AP20336 220 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 DCKP27707 260 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 TIMP3P35625 211 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 CLRN1P58418 232 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 RAP1BP61224 184 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 RAP1AP62834 184 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 SIRPAP78324 504 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 FMODQ06828 376 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 GALEQ14376 348 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 MAD2L1BPQ15013 274 aaPredicted RBP6.07□□□□□ -1.44
SCAF4-204ENST00000467731 GUSBP1Q15486 140 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 KRBOX4Q5JUW0 171 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 OR2A2Q6IF42 318 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 KRT80Q6KB66 452 aa6.07□□□□□ -1.44
SCAF4-204ENST00000467731 FAM214BQ7L5A3 538 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms