RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 NMNAT3Q96T66 252 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 RBM4Q9BWF3 364 aaKnown RBP8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 TSSK6Q9BXA6 273 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 NMNAT2Q9BZQ4 307 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 OR2H1Q9GZK4 316 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 WNT5BQ9H1J7 359 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 KCNN2Q9H2S1 579 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 PLK3Q9H4B4 646 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 FBXO9Q9UK97 447 aaPredicted RBP8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 COA3Q9Y2R0 106 aaPredicted RBP8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 AP4S1Q9Y587 144 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 TIMM10BQ9Y5J6 103 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 F8P00451 2351 aa8.18□□□□□ -1.1
SDCCAG3-208ENST00000466579 MED13LQ71F56 2210 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 LOC100509620A0A075B734 347 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 IQCMA0A1B0GVH7 501 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 A0A1W2PPL8 197 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 TMEM129A0AVI4 362 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 B9A039 149 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 E2F6O75461 281 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 OSMP13725 252 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 FASP25445 335 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 NOS3P29474 1203 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 GRK5P34947 590 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 THBS4P35443 961 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 SERPINF1P36955 418 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 ERFP50548 548 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC25A1P53007 311 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 HSF2Q03933 536 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 PLP2Q04941 152 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 SNTB2Q13425 540 aaKnown RBP8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 AQP6Q13520 282 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 DAG1Q14118 895 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 MSMPQ1L6U9 139 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 TBC1D28Q2M2D7 210 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 LURAP1LQ8IV03 231 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 PARP8Q8N3A8 854 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC37A3Q8NCC5 494 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 SDR9C7Q8NEX9 313 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC26A10Q8NG04 563 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 OR52E2Q8NGJ4 325 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 OR5K1Q8NHB7 308 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 C11orf40Q8WZ69 217 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 TRMT61AQ96FX7 289 aaKnown RBP8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 TSSK2Q96PF2 358 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 DOK1Q99704 481 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 GABARAPL1Q9H0R8 117 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 RNF121Q9H920 327 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 CCNB1IP1Q9NPC3 277 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 DLL4Q9NR61 685 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 CMC2Q9NRP2 79 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 TBC1D23Q9NUY8 699 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 ATPIF1Q9UII2 106 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 KLHL21Q9UJP4 597 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 SPEF1Q9Y4P9 236 aa8.17□□□□□ -1.1
SDCCAG3-208ENST00000466579 OR6C6A6NF89 314 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 MPZL1O95297 269 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 SOX14O95416 240 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 IGHV4-39P01824 125 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 TFP02787 698 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 OR4A8P0C604 315 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 PRKACGP22612 351 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 STOMP27105 288 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 APEX1P27695 318 aaKnown RBP8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 GGT2P36268 569 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 CDKN1AP38936 164 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 DAPP51397 102 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 ARHGDIAP52565 204 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 ATP5J2P56134 94 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 RPS23P62266 143 aaKnown RBP8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 CDK5Q00535 292 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 GLO1Q04760 184 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 SCRN3Q0VDG4 424 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 CHD3Q12873 2000 aaKnown RBP8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 KRTAP27-1Q3LI81 207 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC36A3Q495N2 470 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 Q5PR19 223 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC35F1Q5T1Q4 408 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC27A4Q6P1M0 643 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 VASH1Q7L8A9 365 aaPredicted RBP8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 HIPK1Q86Z02 1210 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 C1orf174Q8IYL3 243 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 ALDH16A1Q8IZ83 802 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 AKR7LQ8NHP1 331 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 TEX47Q8TBZ9 253 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 MRPL24Q96A35 216 aaKnown RBP8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 PERPQ96FX8 193 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 BDH2Q9BUT1 245 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 CACNG6Q9BXT2 260 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 ZNF556Q9HAH1 456 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 SLC25A19Q9HC21 320 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 SRA1Q9HD15 236 aaKnown RBP8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 EMC7Q9NPA0 242 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 RPRD1BQ9NQG5 326 aaKnown RBP8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 KCNG2Q9UJ96 466 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 LHFPL6Q9Y693 200 aa8.16□□□□□ -1.1
SDCCAG3-208ENST00000466579 IGLV3-9A0A075B6K5 115 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 VSTM5A8MXK1 200 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms