RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 PRSS35Q8N3Z0 413 aa18.76■□□□□ 0.59
PPP1R3F-203ENST00000466508 TMEM251Q8N6I4 163 aa18.76■□□□□ 0.59
PPP1R3F-203ENST00000466508 ABCB9Q9NP78 766 aa18.76■□□□□ 0.59
PPP1R3F-203ENST00000466508 GLTPQ9NZD2 209 aa18.76■□□□□ 0.59
PPP1R3F-203ENST00000466508 CYB5R1Q9UHQ9 305 aa18.76■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZFHX4Q86UP3 3567 aa18.76■□□□□ 0.59
PPP1R3F-203ENST00000466508 CFAP47Q6ZTR5 3102 aa18.76■□□□□ 0.59
PPP1R3F-203ENST00000466508 A0A087WV48 116 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 A0A1B0GTH9 108 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 A0A1W2PPK0 400 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 TRABD2BA6NFA1 517 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 CSNK1A1P48729 337 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 OR7E24Q6IFN5 339 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZIC4Q8N9L1 334 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 CPNE4Q96A23 557 aaPredicted RBP18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 COMMD4Q9H0A8 199 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 MIXL1Q9H2W2 232 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 TIGARQ9NQ88 270 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF254O75437 659 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF432O94892 652 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 CCR9P51686 369 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 HSD17B12Q53GQ0 312 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 WDR38Q5JTN6 314 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 ABLIM2Q6H8Q1 611 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 DEGS2Q6QHC5 323 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZFP62Q8NB50 900 aaPredicted RBP18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 TMEM54Q969K7 222 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 SCMH1Q96GD3 660 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 SEC61A2Q9H9S3 476 aa18.75■□□□□ 0.59
PPP1R3F-203ENST00000466508 KIR3DL2P43630 455 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 LHX2P50458 406 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF133P52736 654 aaPredicted RBP18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 IFITM3Q01628 133 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 CDC20Q12834 499 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 Q499Y3 187 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 PDSS1Q5T2R2 415 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 CORO6Q6QEF8 472 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 SNX29P2Q8IUI4 249 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF676Q8N7Q3 588 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 OR6N1Q8NGY5 312 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 RNF133Q8WVZ7 376 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 DERL3Q96Q80 235 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 SCNM1Q9BWG6 230 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 NOX4Q9NPH5 578 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 WASF3Q9UPY6 502 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 CHD8Q9HCK8 2581 aa18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 NCOA6Q14686 2063 aaPredicted RBP18.74■□□□□ 0.59
PPP1R3F-203ENST00000466508 TPRP12270 2363 aaKnown RBP18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 A0A0G2JK05 382 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 ACOD1A6NK06 481 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF716A6NP11 495 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF12P17014 697 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 SPINK2P20155 84 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 RAB3BP20337 219 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 CDAP32320 146 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 CCL11P51671 97 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 OR10A3P58181 314 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 PPP3R1P63098 170 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 KCNMB1Q16558 191 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF766Q5HY98 468 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 C10orf128Q5T292 105 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 SFXN4Q6P4A7 337 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 FDCSPQ8NFU4 85 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 ACOT12Q8WYK0 555 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 PNPLA2Q96AD5 504 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 SLC6A15Q9H2J7 730 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 COMMD3Q9UBI1 195 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 FOXD3Q9UJU5 478 aaPredicted RBP18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 UGT2A1Q9Y4X1 527 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 FLVCR1Q9Y5Y0 555 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 V9GYH0 126 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 AKAP13Q12802 2813 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 TRBV5-5A0A0J9YX44 114 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF891A8MT65 544 aaPredicted RBP18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 LOC110117498-PIK3R3F6TDL0 507 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 PIN1P1O15428 100 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 UPK1BO75841 260 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 PNPP00491 289 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 MAPK3P27361 379 aaPredicted RBP18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 SELENOPP49908 381 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 RGS21Q2M5E4 152 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 ZNF544Q6NX49 715 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 MZT2AQ6P582 158 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 TMEM178AQ8NBL3 297 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 ROBO4Q8WZ75 1007 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 INTS12Q96CB8 462 aaKnown RBP18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 KCTD12Q96CX2 325 aaKnown RBP18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 SH3GL3Q99963 347 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 C1orf198Q9H425 327 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 EMC7Q9NPA0 242 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 RCE1Q9Y256 329 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 LHFPL6Q9Y693 200 aa18.73■□□□□ 0.59
PPP1R3F-203ENST00000466508 OCM2P0CE71 109 aa18.72■□□□□ 0.59
PPP1R3F-203ENST00000466508 TNFSF10P50591 281 aa18.72■□□□□ 0.59
PPP1R3F-203ENST00000466508 CLDN18P56856 261 aa18.72■□□□□ 0.59
PPP1R3F-203ENST00000466508 PPIAP62937 165 aaKnown RBP18.72■□□□□ 0.59
PPP1R3F-203ENST00000466508 MFGE8Q08431 387 aaPredicted RBP18.72■□□□□ 0.59
PPP1R3F-203ENST00000466508 IDNKQ5T6J7 187 aa18.72■□□□□ 0.59
PPP1R3F-203ENST00000466508 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms