RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 TRAF3IP2O43734 574 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ICMTO60725 284 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ZNF254O75437 659 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 NEURL1O76050 574 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ZNF432O94892 652 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 PLGP00747 810 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 KRT8P05787 483 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 PGA4P0DJD7 388 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 PGA3P0DJD8 388 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 CD37P11049 281 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 APEX1P27695 318 aaKnown RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SHC1P29353 583 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 RBMS1P29558 406 aaKnown RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 DCTDP32321 178 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 GDI2P50395 445 aaKnown RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SUCLG1P53597 346 aaKnown RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 GPR85P60893 370 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 LCN6P62502 163 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 CSNK2A1P68400 391 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 IFITM3Q01628 133 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ATP1A4Q13733 1029 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SLC17A1Q14916 467 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ETFDHQ16134 617 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 HYAL4Q2M3T9 481 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ZNF181Q2M3W8 571 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 YIF1BQ5BJH7 314 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ZMAT1Q5H9K5 638 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 CEP78Q5JTW2 689 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SPANXN2Q5MJ10 180 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ABHD17BQ5VST6 288 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SLC18B1Q6NT16 456 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 MZT2AQ6P582 158 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 KCTD18Q6PI47 426 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SLC25A47Q6Q0C1 308 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 DPY19L4Q7Z388 723 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 CEACAM19Q7Z692 300 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 UEVLDQ8IX04 471 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 BEST3Q8N1M1 668 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 GHDCQ8N2G8 530 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 RFLNBQ8N5W9 214 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 PARP16Q8N5Y8 322 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SLC26A10Q8NG04 563 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 RNF128Q8TEB7 428 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 CHPT1Q8WUD6 406 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 INTS12Q96CB8 462 aaKnown RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 CMTM3Q96MX0 182 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 OR5B2Q96R09 309 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 KCNS3Q9BQ31 491 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 FAM173AQ9BQD7 235 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SLC30A2Q9BRI3 323 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 TTYH2Q9BSA4 534 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 CCDC32Q9BV29 185 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 C6orf62Q9GZU0 229 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 PPIL3Q9H2H8 161 aaKnown RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 TPK1Q9H3S4 243 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 SMURF1Q9HCE7 757 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ASCL3Q9NQ33 180 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 DEPPQ9NTK1 212 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 LRFN1Q9P244 771 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 ABI3Q9P2A4 366 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 KCNG2Q9UJ96 466 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 LAMP5Q9UJQ1 280 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 GNG8Q9UK08 70 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 NPIPA1Q9UND3 350 aa6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 COA3Q9Y2R0 106 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P6-201ENST00000438508 EP300Q09472 2414 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 RTTNQ86VV8 2226 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 A0A0G2JK05 382 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 LRRC3CA6NJW4 275 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 CD8B2A6NJW9 211 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 OR4C45A6NMZ5 311 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 ZNF814B7Z6K7 855 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 CASKO14936 926 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 MAGEB4O15481 346 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 TLX3O43711 291 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 TMCC2O75069 709 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 UPK1BO75841 260 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 ARL6IP5O75915 188 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 ZFPL1O95159 310 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 IGHG1P01857 330 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 RAF1P04049 648 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 HPNP05981 417 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 NR2C1P13056 603 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 ZNF823P16415 610 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 ZNF43P17038 809 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 EDNRAP25101 427 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 LAP3P28838 519 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 DNASE1L1P49184 302 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 EVX1P49640 407 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 BIDP55957 195 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 NANOS3P60323 173 aaKnown RBP6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 PPP3R1P63098 170 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 GABREP78334 506 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 POU3F1Q03052 451 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 MXD1Q05195 221 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 SLC3A1Q07837 685 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 RIN1Q13671 783 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 MELKQ14680 651 aa6.3□□□□□ -1.4
HMGN1P6-201ENST00000438508 OXA1LQ15070 435 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms