RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	ARHGAP40	Q5TG30	622 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	OR8S1	Q8NH09	359 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	PPP1R14A	Q96A00	147 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	ELMOD3	Q96FG2	381 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	LURAP1	Q96LR2	239 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	SFXN2	Q96NB2	322 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	SSX3	Q99909	188 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	MFRP	Q9BY79	579 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	REG4	Q9BYZ8	158 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	FRRS1L	Q9P0K9	344 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	KLHL9	Q9P2J3	617 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	ZNF281	Q9Y2X9	895 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	COL4A2	P08572	1712 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	CELSR3	Q9NYQ7	3312 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	ANXA2P2	A6NMY6	339 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	XKRY	O14609	159 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	PDCD5	O14737	125 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	GPRIN2	O60269	458 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	EIF3G	O75821	320 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	KRT33A	O76009	404 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	ANXA2	P07355	339 aa	Known RBP	11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	FBL	P22087	321 aa	Known RBP	11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	SDHA	P31040	664 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	GABRA4	P48169	554 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	CARD18	P57730	90 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	HSD11B2	P80365	405 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	RPL18	Q07020	188 aa	Known RBP	11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	PLCXD2	Q0VAA5	305 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	STAC2	Q6ZMT1	411 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	SLC35F3	Q8IY50	421 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	TDH	Q8IZJ6	230 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	BOLL	Q8N9W6	283 aa	Known RBP	11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	OR5AK2	Q8NH90	309 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	LPAR4	Q99677	370 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	TAS2R10	Q9NYW0	307 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	MRM2	Q9UI43	246 aa	Known RBP	11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	MMACHC	Q9Y4U1	282 aa		11.73	□□□□□ -0.53
COL12A1-205	ENST00000425443	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443		A0A1B0GUH1	482 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	METTL21EP	A6NDL7	271 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	WRB	O00258	174 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	UPK3A	O75631	287 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	EFNB2	P52799	333 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	HFE	Q30201	348 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	NHLRC3	Q5JS37	347 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	SHISA6	Q6ZSJ9	500 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	MARCH3	Q86UD3	253 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	MEIOB	Q8N635	442 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	FCAMR	Q8WWV6	532 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	NSMAF	Q92636	917 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	DAZL	Q92904	295 aa	Known RBP	11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	LANCL2	Q9NS86	450 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	HIF3A	Q9Y2N7	669 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443		A0A1W2PR77	199 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	MFSD2B	A6NFX1	497 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443		H7C2Y5	167 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	PYCARD-AS1	I3L0S3	204 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	ITGA10	O75578	1167 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	WISP1	O95388	367 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	ACAA1	P09110	424 aa	Predicted RBP	11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	ACSM4	P0C7M7	580 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	RPS4X	P62701	263 aa	Known RBP	11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	RBMS3	Q6XE24	437 aa	Known RBP	11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	SLC29A4	Q7RTT9	530 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	GLB1L2	Q8IW92	636 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	TMEM106A	Q96A25	262 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	S100A16	Q96FQ6	103 aa	Known RBP	11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	PHF7	Q9BWX1	381 aa	Predicted RBP	11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	GSX2	Q9BZM3	304 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	KCNMB2	Q9Y691	235 aa		11.72	□□□□□ -0.53
COL12A1-205	ENST00000425443	OR2M5	A3KFT3	312 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	MB	P02144	154 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	CLPS	P04118	112 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	MYF5	P13349	255 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	GALNS	P34059	522 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	H2BFS	P57053	126 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	TAS2R20	P59543	309 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	DEFA6	Q01524	100 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	IL10RA	Q13651	578 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	CBFB	Q13951	182 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	TOMM34	Q15785	309 aa	Predicted RBP	11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	FAM69A	Q5T7M9	428 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	LRRN1	Q6UXK5	716 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	SLC16A9	Q7RTY1	509 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	PLXDC1	Q8IUK5	500 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	KDM8	Q8N371	416 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	OR5M1	Q8NGP8	315 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	TSEN15	Q8WW01	171 aa	Known RBP	11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	CCNL2	Q96S94	520 aa	Predicted RBP	11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	NUDT9	Q9BW91	350 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	FOXQ1	Q9C009	403 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	MOK	Q9UQ07	419 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	TMEM131	Q92545	1883 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	LOC390937	A0A1W2PQ73	354 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	FRG2C	A6NGY1	282 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	C10orf142	B7Z368	130 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	DUX1	O43812	170 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	OR6A2	O95222	327 aa		11.71	□□□□□ -0.53
COL12A1-205	ENST00000425443	SLC6A8	P48029	635 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms