RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ARL6Q9H0F7 186 aa22.74■■□□□ 1.23
C9orf40-201ENST00000376854 C11orf88Q6PI97 169 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 GAL3ST1Q99999 423 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 COQ3Q9NZJ6 369 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 COPS7AQ9UBW8 275 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 A0A1W2PPC1 479 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 SDC3O75056 442 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 ALKAL2Q6UX46 152 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 SLC29A4Q7RTT9 530 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 SEH1LQ96EE3 360 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 MVB12AQ96EY5 273 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 ZNF587Q96SQ5 575 aaPredicted RBP22.73■■□□□ 1.23
C9orf40-201ENST00000376854 REG4Q9BYZ8 158 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 PRMT8Q9NR22 394 aaPredicted RBP22.73■■□□□ 1.23
C9orf40-201ENST00000376854 SDHAF2Q9NX18 166 aa22.73■■□□□ 1.23
C9orf40-201ENST00000376854 B3GALNT1O75752 331 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 MPZL1O95297 269 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 LPLP06858 475 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 PPP3CBP16298 524 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 CD38P28907 300 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 TAS2R19P59542 299 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 GLO1Q04760 184 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 MPPED2Q15777 294 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 B3GNTL1Q67FW5 361 aaPredicted RBP22.72■■□□□ 1.23
C9orf40-201ENST00000376854 C17orf82Q86X59 251 aaPredicted RBP22.72■■□□□ 1.23
C9orf40-201ENST00000376854 OR52N5Q8NH56 324 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 COQ8AQ8NI60 647 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 SLC25A44Q96H78 314 aaPredicted RBP22.72■■□□□ 1.23
C9orf40-201ENST00000376854 C1QTNF6Q9BXI9 259 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 POFUT1Q9H488 388 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 MED11Q9P086 117 aa22.72■■□□□ 1.23
C9orf40-201ENST00000376854 CGGBP1Q9UFW8 167 aaPredicted RBP22.72■■□□□ 1.23
C9orf40-201ENST00000376854 COA3Q9Y2R0 106 aaPredicted RBP22.72■■□□□ 1.23
C9orf40-201ENST00000376854 A0A1W2PR77 199 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 IGHMP01871 453 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 ITGB2P05107 769 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 IGFBP3P17936 291 aaPredicted RBP22.71■■□□□ 1.23
C9orf40-201ENST00000376854 PNLIPRP2P54317 469 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 HYAL4Q2M3T9 481 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 GRINAQ7Z429 371 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 GPR119Q8TDV5 335 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 CXorf58Q96LI9 332 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 LMAN1LQ9HAT1 526 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 SLC2A4RGQ9NR83 387 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 RHPN2P1A8MT19 583 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 SULT1C2O00338 296 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 AHSA1O95433 338 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 RAB3DO95716 219 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 NMBP08949 121 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 FSTP19883 344 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 ARL4DP49703 201 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 GMFBP60983 142 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 RGS7BPQ6MZT1 257 aaPredicted RBP22.71■■□□□ 1.23
C9orf40-201ENST00000376854 ZNF454Q8N9F8 522 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 GALNT11Q8NCW6 608 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 DUSP19Q8WTR2 217 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 SCARB1Q8WTV0 552 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 SLC41A2Q96JW4 573 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 ALX4Q9H161 411 aaPredicted RBP22.71■■□□□ 1.23
C9orf40-201ENST00000376854 UPB1Q9UBR1 384 aa22.71■■□□□ 1.23
C9orf40-201ENST00000376854 MRPS18BQ9Y676 258 aaKnown RBP22.71■■□□□ 1.23
C9orf40-201ENST00000376854 MFSD2BA6NFX1 497 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 GABRA1P14867 456 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 FBLP22087 321 aaKnown RBP22.7■■□□□ 1.22
C9orf40-201ENST00000376854 CRABP1P29762 137 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 OR51A2Q8NGJ7 313 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 OR1N1Q8NGS0 311 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 EMC9Q9Y3B6 208 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 DCDC2BA2VCK2 349 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 FADS1O60427 444 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 COL19A1Q14993 1142 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 TMEM205Q6UW68 189 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 KDM8Q8N371 416 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 TMEM229BQ8NBD8 167 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 OR6M1Q8NGM8 313 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 OR13C3Q8NGS6 347 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 OR1L3Q8NH93 324 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 POTEKPQ9BYX7 375 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 RAB33BQ9H082 229 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 C1orf198Q9H425 327 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 KCNMB2Q9Y691 235 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 R4GMQ9 66 aa22.7■■□□□ 1.22
C9orf40-201ENST00000376854 POM121CA8CG34 1229 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 DOK2O60496 412 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 HLA-DOBP13765 273 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 DNASE1L1P49184 302 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 HSD11B2P80365 405 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 GSG1LQ6UXU4 331 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 CCDC107Q8WV48 283 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 ZNF304Q9HCX3 659 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 CA14Q9ULX7 337 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 HHLA2Q9UM44 414 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 M0QYG6 137 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 SOX1O00570 391 aaPredicted RBP22.69■■□□□ 1.22
C9orf40-201ENST00000376854 MELTFP08582 738 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 IGFBP4P22692 258 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 CD27P26842 260 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 SLC26A5P58743 744 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 NAXDQ8IW45 347 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 GALNT16Q8N428 558 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms