RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 MADCAM1Q13477 382 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 CARD17Q5XLA6 110 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 YRDCQ86U90 279 aaKnown RBP22.25■■□□□ 1.15
CTSA-203ENST00000372459 LINC00346Q8IVM7 164 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 ST7LQ8TDW4 575 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 THRSPQ92748 146 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 ORAI1Q96D31 301 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 TCF7L1Q9HCS4 588 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 MRPS18CQ9Y3D5 142 aaKnown RBP22.25■■□□□ 1.15
CTSA-203ENST00000372459 DOCK10Q96BY6 2186 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 AHCTF1Q8WYP5 2266 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 A0A0J9YW62 118 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 ANKRD61A6NGH8 418 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 RGS13O14921 159 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 PAHP00439 452 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 RAF1P04049 648 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 NPR2P20594 1047 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 DDOSTP39656 456 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 CD96P40200 585 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 SOX2P48431 317 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 NKX2-5P52952 324 aaPredicted RBP22.25■■□□□ 1.15
CTSA-203ENST00000372459 ATAD3CQ5T2N8 411 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 DEGS2Q6QHC5 323 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 OR2B2Q9GZK3 357 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 SLC25A18Q9H1K4 315 aa22.25■■□□□ 1.15
CTSA-203ENST00000372459 ARPC4-TTLL3A0A0A6YYG9 625 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 TNFSF11O14788 317 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 WNT11O96014 354 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 F10P00742 488 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 CLDN17P56750 224 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 POU4F3Q15319 338 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 P2RY14Q15391 338 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 NDUFA5Q16718 116 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 ODF4Q2M2E3 257 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 SPINK14Q6IE38 97 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 ZFP64Q9NPA5 681 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 GTF2A1LQ9UNN4 478 aa22.24■■□□□ 1.15
CTSA-203ENST00000372459 A0A1W2PPL8 197 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 DNPH1O43598 174 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 TMEM127O75204 238 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 PNPP00491 289 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 EIF4EP06730 217 aaKnown RBP22.23■■□□□ 1.15
CTSA-203ENST00000372459 RFPL3SP0C7P2 107 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 NR2C1P13056 603 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 CD82P27701 267 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 GABREP78334 506 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 TAB1Q15750 504 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 HIST3H3Q16695 136 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 SLC25A47Q6Q0C1 308 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 RDH10Q8IZV5 341 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 Q8N402 240 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 MCHR2Q969V1 340 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 FER1L6-AS2Q96M78 137 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 UTP23Q9BRU9 249 aaKnown RBP22.23■■□□□ 1.15
CTSA-203ENST00000372459 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.23■■□□□ 1.15
CTSA-203ENST00000372459 BOKQ9UMX3 212 aaPredicted RBP22.23■■□□□ 1.15
CTSA-203ENST00000372459 RBMX2Q9Y388 322 aaKnown RBP22.23■■□□□ 1.15
CTSA-203ENST00000372459 MED12Q93074 2177 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 SPAARA0A1B0GVQ0 90 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 MEIOCA2RUB1 952 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 HLA-DQB1P01920 261 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 IFITM2Q01629 132 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 TCF15Q12870 199 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 CATSPERDQ86XM0 798 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 BRD7Q9NPI1 651 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 R4GMQ9 66 aa22.23■■□□□ 1.15
CTSA-203ENST00000372459 TRBV5-7A0A0A0MS05 114 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 HMX3A6NHT5 357 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 NPIPA2E9PIF3 369 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 NPIPA3F8WFD2 350 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 TRAPPC6AO75865 159 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 RBMS1P29558 406 aaKnown RBP22.22■■□□□ 1.15
CTSA-203ENST00000372459 AGFG1P52594 562 aaKnown RBP22.22■■□□□ 1.15
CTSA-203ENST00000372459 MFGE8Q08431 387 aaPredicted RBP22.22■■□□□ 1.15
CTSA-203ENST00000372459 STAC2Q6ZMT1 411 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 CREB3L2Q70SY1 520 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 ZNF433Q8N7K0 673 aaPredicted RBP22.22■■□□□ 1.15
CTSA-203ENST00000372459 CLEC1AQ8NC01 280 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 OR10AC1Q8NH08 325 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 RNF133Q8WVZ7 376 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 SFXN2Q96NB2 322 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 C11orf54Q9H0W9 315 aaPredicted RBP22.22■■□□□ 1.15
CTSA-203ENST00000372459 SEC61A2Q9H9S3 476 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 CYB5R1Q9UHQ9 305 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 SLC22A13Q9Y226 551 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 V9GY05 133 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 OTOGLQ3ZCN5 2332 aa22.22■■□□□ 1.15
CTSA-203ENST00000372459 CACNA1CQ13936 2221 aa22.21■■□□□ 1.15
CTSA-203ENST00000372459 IGHV3-15A0A0B4J1V0 119 aa22.21■■□□□ 1.15
CTSA-203ENST00000372459 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.21■■□□□ 1.15
CTSA-203ENST00000372459 NEURL1O76050 574 aa22.21■■□□□ 1.15
CTSA-203ENST00000372459 QDPRP09417 244 aa22.21■■□□□ 1.15
CTSA-203ENST00000372459 SNRPBP14678 240 aaKnown RBP22.21■■□□□ 1.15
CTSA-203ENST00000372459 GDF1P27539 372 aa22.21■■□□□ 1.15
CTSA-203ENST00000372459 CCDC92Q53HC0 331 aaPredicted RBP22.21■■□□□ 1.15
CTSA-203ENST00000372459 CORO6Q6QEF8 472 aa22.21■■□□□ 1.15
CTSA-203ENST00000372459 OR51A4Q8NGJ6 313 aa22.21■■□□□ 1.15
CTSA-203ENST00000372459 TSEN15Q8WW01 171 aaKnown RBP22.21■■□□□ 1.15
CTSA-203ENST00000372459 CAPSLQ8WWF8 208 aa22.21■■□□□ 1.15
CTSA-203ENST00000372459 TMEM106AQ96A25 262 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms