RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 LINC01387J3KSC0 135 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 WNT11O96014 354 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF133P52736 654 aaPredicted RBP10.56□□□□□ -0.72
TRIM40-205ENST00000307859 GFRA1P56159 465 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 CLDN20P56880 219 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 RAC3P60763 192 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 PPP3R1P63098 170 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 CAMK2DQ13557 499 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 WIPI1Q5MNZ9 446 aaPredicted RBP10.56□□□□□ -0.72
TRIM40-205ENST00000307859 ATP1A1-AS1Q5TC04 95 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 LRRN1Q6UXK5 716 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 LINC00696Q6ZRV3 163 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 ESPNLQ6ZVH7 1005 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 CREB3L2Q70SY1 520 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.56□□□□□ -0.72
TRIM40-205ENST00000307859 GALNT16Q8N428 558 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 OR5AK2Q8NH90 309 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 KCTD12Q96CX2 325 aaKnown RBP10.56□□□□□ -0.72
TRIM40-205ENST00000307859 ADGRG7Q96K78 797 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 C4orf45Q96LM5 186 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 SFXN2Q96NB2 322 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 UCN2Q96RP3 112 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 SDHCQ99643 169 aaPredicted RBP10.56□□□□□ -0.72
TRIM40-205ENST00000307859 CCDC32Q9BV29 185 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 MROQ9BYG7 248 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 UGT2A1Q9Y4X1 527 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 DNAJC13O75165 2243 aa10.56□□□□□ -0.72
TRIM40-205ENST00000307859 ISPDA4D126 451 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 TMEM212A6NML5 194 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF726A6NNF4 738 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF879B4DU55 563 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 SMAD9O15198 467 aaKnown RBP10.55□□□□□ -0.72
TRIM40-205ENST00000307859 PIN1P1O15428 100 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 TLX3O43711 291 aaPredicted RBP10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF254O75437 659 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 HPNP05981 417 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 NR2C1P13056 603 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 LAP3P28838 519 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 THBS2P35442 1172 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 KIR3DL2P43630 455 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 CCR9P51686 369 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 RRADP55042 308 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 CLDN17P56750 224 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 RASGEF1BQ0VAM2 473 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF79Q15937 498 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 SFXN4Q6P4A7 337 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 MZT2AQ6P582 158 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 DEGS2Q6QHC5 323 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 KRT77Q7Z794 578 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 SNX29P2Q8IUI4 249 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 LYSMD2Q8IV50 215 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 SULF2Q8IWU5 870 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 PRSS35Q8N3Z0 413 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 OR9K2Q8NGE7 335 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 C11orf40Q8WZ69 217 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 MCHR2Q969V1 340 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 DERL3Q96Q80 235 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 SF3B5Q9BWJ5 86 aaKnown RBP10.55□□□□□ -0.72
TRIM40-205ENST00000307859 HES7Q9BYE0 225 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ZCCHC4Q9H5U6 513 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 B4GALT7Q9UBV7 327 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 LRP12Q9Y561 859 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF407Q9C0G0 2248 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ARPC4-TTLL3A0A0A6YYG9 625 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 IGHV3-15A0A0B4J1V0 119 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 OR5H15A6NDH6 313 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ANKRD61A6NGH8 418 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ARGFXA6NJG6 315 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 TBX1O43435 398 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 NME2P1O60361 137 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 SRSF10O75494 262 aaKnown RBP10.55□□□□□ -0.72
TRIM40-205ENST00000307859 TRAPPC6AO75865 159 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 ZNF432O94892 652 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 RAB3BP20337 219 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 NME2P22392 152 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 RIDAP52758 137 aaKnown RBP10.55□□□□□ -0.72
TRIM40-205ENST00000307859 OR10A3P58181 314 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 KCNMB1Q16558 191 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 Q499Y3 187 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 HSD17B12Q53GQ0 312 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 WDR38Q5JTN6 314 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 CEP78Q5JTW2 689 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 AGAP7PQ5VUJ5 663 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 DCDC5Q6ZRR9 648 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 DCXRQ7Z4W1 244 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 VASH2Q86V25 355 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 CENPSQ8N2Z9 138 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 OR2V1Q8NHB1 315 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 TMEM54Q969K7 222 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 AGAP4Q96P64 663 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 OR2M2Q96R28 347 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 COMMD4Q9H0A8 199 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 NOX4Q9NPH5 578 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 PLA2G3Q9NZ20 509 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 CYB5R1Q9UHQ9 305 aa10.55□□□□□ -0.72
TRIM40-205ENST00000307859 KLF13Q9Y2Y9 288 aaPredicted RBP10.55□□□□□ -0.72
TRIM40-205ENST00000307859 A0A1B0GTH9 108 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 NPIPA2E9PIF3 369 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 NPIPA3F8WFD2 350 aa10.54□□□□□ -0.72
TRIM40-205ENST00000307859 H0YC42 278 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms