RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 HAVCR2Q8TDQ0 301 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 SNAPC3Q92966 411 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 RNF166Q96A37 237 aaPredicted RBP13.85□□□□□ -0.19
LSM6-201ENST00000296581 SMIM19Q96E16 107 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 RBP7Q96R05 134 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 SRXN1Q9BYN0 137 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 TTTY12Q9BZ98 90 aa13.85□□□□□ -0.19
LSM6-201ENST00000296581 MRM2Q9UI43 246 aaKnown RBP13.85□□□□□ -0.19
LSM6-201ENST00000296581 CDV3Q9UKY7 258 aaKnown RBP13.85□□□□□ -0.19
LSM6-201ENST00000296581 ZNF593O00488 134 aaPredicted RBP13.84□□□□□ -0.19
LSM6-201ENST00000296581 NOS1APO75052 506 aaPredicted RBP13.84□□□□□ -0.19
LSM6-201ENST00000296581 GLSO94925 669 aaPredicted RBP13.84□□□□□ -0.19
LSM6-201ENST00000296581 IGHG1P01857 330 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 CBX5P45973 191 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 NHLH1Q02575 133 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 THEM4Q5T1C6 240 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 OR10Z1Q8NGY1 313 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 FOXN4Q96NZ1 517 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 SCPEP1Q9HB40 452 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 TRABD2BA6NFA1 517 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 H0YC42 278 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 SC5DO75845 299 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 CDRT1O95170 752 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 TACSTD2P09758 323 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 CD46P15529 392 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 SLC3A1Q07837 685 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 MRPL28Q13084 256 aaKnown RBP13.84□□□□□ -0.19
LSM6-201ENST00000296581 HIST3H3Q16695 136 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 PCK2Q16822 640 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 GALNTL5Q7Z4T8 443 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 NOXA1Q86UR1 476 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 MS4A15Q8N5U1 240 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 SCMH1Q96GD3 660 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 UCN2Q96RP3 112 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 KLHL9Q9P2J3 617 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 KCNG2Q9UJ96 466 aa13.84□□□□□ -0.19
LSM6-201ENST00000296581 FREM2Q5SZK8 3169 aa13.83□□□□□ -0.19
LSM6-201ENST00000296581 CD8B2A6NJW9 211 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 HSPB2A8KAH6 182 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ZNF891A8MT65 544 aaPredicted RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 LEUTXA8MZ59 168 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 KLRC4-KLRK1H3BQV0 150 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 EIF1AYO14602 144 aaKnown RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 UPK3AO75631 287 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 HRGP04196 525 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 OR8G3PP0DMU2 310 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 CD8BP10966 210 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 POU3F2P20265 443 aaPredicted RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 RPS27P42677 84 aaKnown RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 CLRN1P58418 232 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ADAM8P78325 824 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 CAMK2DQ13557 499 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 INSL4Q14641 139 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 HSPB2Q16082 182 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 TEX30Q5JUR7 227 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 HBMQ6B0K9 141 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 CREB3L2Q70SY1 520 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 FAM220AQ7Z4H9 259 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ZNF454Q8N9F8 522 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 OR2V1Q8NHB1 315 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ASB17Q8WXJ9 295 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 GHSRQ92847 366 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 SLC25A46Q96AG3 418 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 SF3B5Q9BWJ5 86 aaKnown RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 SNTG1Q9NSN8 517 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 A0A075B6Q4 140 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ARPC4-TTLL3A0A0A6YYG9 625 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 SMAD9O15198 467 aaKnown RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 SSX4O60224 188 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ZNF780AO75290 641 aaPredicted RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 APOA1P02647 267 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 SDC2P34741 201 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 PSMB10P40306 273 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 RFC3P40938 356 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 STARP49675 285 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 MEOX1P50221 254 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 GDI2P50395 445 aaKnown RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 RORCP51449 518 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 SUCLG1P53597 346 aaKnown RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 CLDN15P56746 228 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 CARD18P57730 90 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 SLC17A1Q14916 467 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 TBRG1Q3YBR2 411 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 SLC18B1Q6NT16 456 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 TMEM251Q8N6I4 163 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ZFP62Q8NB50 900 aaPredicted RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 OR9K2Q8NGE7 335 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ABHD4Q8TB40 342 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 THEM6Q8WUY1 208 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 AMELYQ99218 206 aa13.83□□□□□ -0.2
LSM6-201ENST00000296581 ING1Q9UK53 422 aaPredicted RBP13.83□□□□□ -0.2
LSM6-201ENST00000296581 IGHV3-15A0A0B4J1V0 119 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 ZNF726A6NNF4 738 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 PSMD9O00233 223 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 MPZL1O95297 269 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 CELA3AP09093 270 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 SPARCP09486 303 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 EDNRAP25101 427 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 CLDN17P56750 224 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms