RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 LRP12Q9Y561 859 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 FUOMA2VDF0 154 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 ZNF726A6NNF4 738 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 GPR171O14626 319 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 ELK1P19419 428 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 KLK2P20151 261 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 ITGA3P26006 1051 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 HIST3H3Q16695 136 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 SLC25A47Q6Q0C1 308 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 DEGS2Q6QHC5 323 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 OR14L1PQ8NHC6 308 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 OR2B2Q9GZK3 357 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 B3GAT2Q9NPZ5 323 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 CYSLTR2Q9NS75 346 aa24.62■■□□□ 1.53
CCM2-201ENST00000258781 CACNA1CQ13936 2221 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 A0A0J9YW62 118 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 FAM25AB3EWG3 89 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 FAM25CB3EWG5 89 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 FAM25GB3EWG6 89 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 TLX3O43711 291 aaPredicted RBP24.61■■□□□ 1.53
CCM2-201ENST00000258781 RAF1P04049 648 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 NR2C1P13056 603 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 CD96P40200 585 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 DCXRQ7Z4W1 244 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 TRMT10AQ8TBZ6 339 aaKnown RBP24.61■■□□□ 1.53
CCM2-201ENST00000258781 C11orf40Q8WZ69 217 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 FER1L6-AS2Q96M78 137 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 ZFP64Q9NPA5 681 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 TBC1D24Q9ULP9 559 aa24.61■■□□□ 1.53
CCM2-201ENST00000258781 BOKQ9UMX3 212 aaPredicted RBP24.61■■□□□ 1.53
CCM2-201ENST00000258781 TRBV5-7A0A0A0MS05 114 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 SLC2A2P11168 524 aaPredicted RBP24.6■■□□□ 1.53
CCM2-201ENST00000258781 ATF1P18846 271 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 AGFG1P52594 562 aaKnown RBP24.6■■□□□ 1.53
CCM2-201ENST00000258781 SCN1BQ07699 218 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 SYT9Q86SS6 491 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 YRDCQ86U90 279 aaKnown RBP24.6■■□□□ 1.53
CCM2-201ENST00000258781 SAMD12Q8N8I0 201 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 CLEC1AQ8NC01 280 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 UTP23Q9BRU9 249 aaKnown RBP24.6■■□□□ 1.53
CCM2-201ENST00000258781 SLITRK2Q9H156 845 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 AK6Q9Y3D8 172 aaKnown RBP24.6■■□□□ 1.53
CCM2-201ENST00000258781 ARGFXA6NJG6 315 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 WNT11O96014 354 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 APOA1P02647 267 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 CSF3P09919 207 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 NPR2P20594 1047 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 OR7E24Q6IFN5 339 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 SPATC1Q76KD6 591 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 CATSPERDQ86XM0 798 aa24.6■■□□□ 1.53
CCM2-201ENST00000258781 DMXL2Q8TDJ6 3036 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 A0A1W2PQ09 198 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 RFPL3SP0C7P2 107 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 FOXO1Q12778 655 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 IL18Q14116 193 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 ASB18Q6ZVZ8 466 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 LINC00346Q8IVM7 164 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 FAM173AQ9BQD7 235 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 EXTL2Q9UBQ6 330 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 R4GMQ9 66 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 APC2O95996 2303 aa24.59■■□□□ 1.53
CCM2-201ENST00000258781 TNFSF11O14788 317 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 SRSF10O75494 262 aaKnown RBP24.58■■□□□ 1.53
CCM2-201ENST00000258781 NEURL1O76050 574 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 PNPP00491 289 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 MAGEB1P43366 347 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 CLDN17P56750 224 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 CREB3L2Q70SY1 520 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 RNF133Q8WVZ7 376 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 MCHR2Q969V1 340 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 SMAD5Q99717 465 aaKnown RBP24.58■■□□□ 1.53
CCM2-201ENST00000258781 SLC25A18Q9H1K4 315 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 CYB5R1Q9UHQ9 305 aa24.58■■□□□ 1.53
CCM2-201ENST00000258781 A0A1W2PPL8 197 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 F10P00742 488 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 TALDO1P37837 337 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 AGAP7PQ5VUJ5 663 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 CARD17Q5XLA6 110 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 SPINK14Q6IE38 97 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 IL17RDQ8NFM7 739 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 HTRA1Q92743 480 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 TCF7L1Q9HCS4 588 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 MALT1Q9UDY8 824 aa24.58■■□□□ 1.52
CCM2-201ENST00000258781 PINLYPA6NC86 204 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 PAHP00439 452 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 EIF4EP06730 217 aaKnown RBP24.57■■□□□ 1.52
CCM2-201ENST00000258781 SOX2P48431 317 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 RAC3P60763 192 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 MFGE8Q08431 387 aaPredicted RBP24.57■■□□□ 1.52
CCM2-201ENST00000258781 KCNMB1Q16558 191 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 GDPD3Q7L5L3 318 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 OR9K2Q8NGE7 335 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 ORAI1Q96D31 301 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 SFXN2Q96NB2 322 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 GFI1Q99684 422 aa24.57■■□□□ 1.52
CCM2-201ENST00000258781 NPIPA2E9PIF3 369 aa24.56■■□□□ 1.52
CCM2-201ENST00000258781 NPIPA3F8WFD2 350 aa24.56■■□□□ 1.52
CCM2-201ENST00000258781 CDK2AP1O14519 115 aa24.56■■□□□ 1.52
CCM2-201ENST00000258781 HLA-DQB1P01920 261 aa24.56■■□□□ 1.52
CCM2-201ENST00000258781 GDF1P27539 372 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms