RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KBTBD8Q8NFY9 601 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 OR52E2Q8NGJ4 325 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 SMAP2Q8WU79 429 aaPredicted RBP9.8□□□□□ -0.84
SF3B6-201ENST00000233468 PYDC1Q8WXC3 89 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 LRTOMTQ8WZ04 291 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 STMN2Q93045 179 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 MBD6Q96DN6 1003 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 NMNAT3Q96T66 252 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 DHRS9Q9BPW9 319 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 NUAK2Q9H093 628 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 RACGAP1Q9H0H5 632 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 NTN4Q9HB63 628 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 POLE4Q9NR33 117 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 BEX4Q9NWD9 120 aaPredicted RBP9.8□□□□□ -0.84
SF3B6-201ENST00000233468 UGT2A1Q9Y4X1 527 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 ABCA2Q9BZC7 2435 aa9.8□□□□□ -0.84
SF3B6-201ENST00000233468 ARID1AO14497 2285 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 IGKV1D-43A0A0B4J1Z2 117 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 A0A1W2PPR1 153 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 ATE1O95260 518 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 SOX14O95416 240 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 PLAUP00749 431 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 HLA-DQA2P01906 255 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 CTLA4P16410 223 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 PRKACGP22612 351 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 APOBEC3AP31941 199 aaPredicted RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 GRK5P34947 590 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 FABP6P51161 128 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 PGGHGQ32M88 737 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 SLC35F1Q5T1Q4 408 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 LCE2CQ5TA81 110 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 FAHD1Q6P587 224 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 ARL9Q6T311 187 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 PTCHD4Q6ZW05 846 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 ZBTB46Q86UZ6 589 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 C1orf174Q8IYL3 243 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 PARP8Q8N3A8 854 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 SLC30A7Q8NEW0 376 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 SDR9C7Q8NEX9 313 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 NUP37Q8NFH4 326 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 PROKR2Q8NFJ6 384 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 OR10H5Q8NGA6 315 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 NABP1Q96AH0 204 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 PLEKHA8Q96JA3 519 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 RBM4BQ9BQ04 359 aaKnown RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 RBM4Q9BWF3 364 aaKnown RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 CDADC1Q9BWV3 514 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 PLA2G12AQ9BZM1 189 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 GRIP2Q9C0E4 1043 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 GABARAPL1Q9H0R8 117 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 CDH20Q9HBT6 801 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 SRA1Q9HD15 236 aaKnown RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 RPRD1BQ9NQG5 326 aaKnown RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 CMC2Q9NRP2 79 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 KRT84Q9NSB2 600 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 EIF3KQ9UBQ5 218 aaKnown RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 KCNG2Q9UJ96 466 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 NDRG4Q9ULP0 352 aaKnown RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 B9D1Q9UPM9 204 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 MOKQ9UQ07 419 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 COA3Q9Y2R0 106 aaPredicted RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 POLR1DQ9Y2S0 133 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 ORC6Q9Y5N6 252 aa9.79□□□□□ -0.84
SF3B6-201ENST00000233468 FN1P02751 2386 aaKnown RBP9.79□□□□□ -0.84
SF3B6-201ENST00000233468 DNHD1Q96M86 4753 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 IGHV2OR16-5A0A0B4J2B6 119 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 ATP6V1G2-DDX39BF2Z307 99 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 SMPD2O60906 423 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF823P16415 610 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF14P17017 642 aaPredicted RBP9.78□□□□□ -0.84
SF3B6-201ENST00000233468 TTKP33981 857 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 SLC25A1P53007 311 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 AQP6Q13520 282 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 DAG1Q14118 895 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 GINS1Q14691 196 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 RAB39AQ14964 217 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 KCNMB1Q16558 191 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 DEFB113Q30KQ7 82 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 AMIGO2Q86SJ2 522 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 KRTAP1-3Q8IUG1 177 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 HS3ST5Q8IZT8 346 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 OR6V1Q8N148 313 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 MUC15Q8N387 334 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 NPEPL1Q8NDH3 523 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 OR8D4Q8NGM9 314 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 IPCEF1Q8WWN9 437 aaPredicted RBP9.78□□□□□ -0.84
SF3B6-201ENST00000233468 TRMT61AQ96FX7 289 aaKnown RBP9.78□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF416Q9BWM5 594 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 CA10Q9NS85 328 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 ZNF224Q9NZL3 707 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 REV1Q9UBZ9 1251 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 LAMP3Q9UQV4 416 aa9.78□□□□□ -0.84
SF3B6-201ENST00000233468 OR6C68A6NDL8 312 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF503-AS2A6NEH8 195 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 E7EQL1 145 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 SNAP29O95721 258 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 MMP7P09237 267 aaPredicted RBP9.77□□□□□ -0.85
SF3B6-201ENST00000233468 PATE4P0C8F1 98 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 COX5BP10606 129 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF32P17041 273 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms