RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Fem1abQ8C0T1 654 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Vmn1r200Q8R281 312 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 BanpQ8VBU8 548 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Cdc42ep1Q91W92 409 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 CrtapQ9CYD3 400 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Lypd6bQ9D7F2 191 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Prps1Q9D7G0 318 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Jam3Q9D8B7 310 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Slc25a18Q9DB41 320 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Rp2Q9EPK2 347 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Ch25hQ9Z0F5 298 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 KcpQ3U492 1550 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 A26c2A0A140LHE4 291 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Klhl15A2AAX3 604 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Prdm13E9PZZ1 754 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 4933408B17RikG3X9B4 273 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Bbip1J3QMK2 67 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Ms4a18J3QN01 344 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 GzmmO08643 264 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Bet1O35623 118 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Rad51dO55230 329 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Eef1a1P10126 462 aaKnown RBP8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Fv1P70213 459 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Masp1P98064 704 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Milr1Q3TB92 246 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 1700066B19RikQ3TS39 127 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Nkx6-3Q3UHX8 262 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm8332Q3UTA4 144 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Clns1aQ61189 236 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 SprQ64105 261 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Fam122bQ6NZE7 255 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 CblcQ80XL1 496 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 P4htmQ8BG58 503 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Kbtbd11Q8BNW9 633 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Lats1Q8BYR2 1129 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Q8C4X7 151 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Nsun3Q8CCT7 348 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr215Q8VF82 310 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr531Q8VGL2 304 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Fitm1Q91V79 292 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Sfxn5Q925N0 342 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Slco1b2Q9JJL3 689 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Sfrp5Q9WU66 314 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Nprl2Q9WUE4 380 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 CN725425A0A087WRU1 652 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Igkv6-29A0A0G2JEI6 115 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm2022A0A1Y7VLT7 144 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr1018A2ASV3 311 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm8126E9Q1N7 198 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm21411J3KMS0 136 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Opn1mwO35599 359 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Nipsnap1O55125 284 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 HexaP29416 528 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Dlx5P70396 289 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 B630019K06RikQ7TNS5 333 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr1225Q7TR01 311 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Bdh1Q80XN0 343 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Cggbp1Q8BHG9 167 aaKnown RBP8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm11541Q8C4D8 108 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 NraddQ8CJ26 228 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Fn3krpQ8K274 309 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Cd177Q8R2S8 817 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Rfc3Q8R323 356 aaKnown RBP8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr461Q8VF30 313 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr883Q8VF64 309 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr98Q8VFD9 309 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Atg5Q99J83 275 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 P2ry12Q9CPV9 347 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Q9D4G1 230 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Eif3fQ9DCH4 361 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Scamp2Q9ERN0 329 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 SclyQ9JLI6 432 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Usp18Q9WTV6 368 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 LipgQ9WVG5 500 aa8.89□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Igkv12-38A0A0G2JEI7 115 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Prss47A0A0N4SVQ0 395 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Igkv15-103A0A140T8P3 115 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm13090A2A899 111 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Col9a3A2ACT7 680 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Esp15A8R0U8 85 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Vmn2r34E9PVI0 852 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Vmn2r41E9Q5C7 852 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Zfp707F6QUN2 391 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Vmn2r40F6W043 852 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Vmn2r37F8VQD3 802 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Vmn2r36K7N741 852 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Hdac3O88895 424 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Ccl4P14097 92 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Mmp2P33434 662 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Ufd1P70362 307 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 MamstrQ0ZCJ7 421 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 CfiQ61129 603 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Foxs1Q61574 329 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Svs6Q64356 99 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Mvb12aQ78HU3 271 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr1115Q7TR53 326 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr517Q7TRU4 314 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Oxa1lQ8BGA9 433 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Muc20Q8BUE7 656 aa8.88□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Q8C3I9 435 aa8.88□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 54.2 ms