RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Dcpp1L7N1X9 171 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 FaslgP41047 279 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Lefty2P57785 368 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Csrp1P97315 193 aaKnown RBP17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 NfkbidQ2TB02 327 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Slc35a1Q61420 336 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Lcn3Q62471 182 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Tas2r113Q7M711 309 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Tmbim1Q8BJZ3 309 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Mab21l2Q8BPP1 359 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Phf21bQ8C966 487 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Vmn1r200Q8R281 312 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 BanpQ8VBU8 548 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Zfp810Q99K45 461 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Commd4Q9CQ02 199 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Sult1c2Q9D939 296 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Htr6Q9R1C8 440 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Padi1Q9Z185 662 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm11214V9GX06 183 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Prob1A0A087WR45 1010 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 4930563M21RikA0A1L1SUT5 578 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm5286E0CXI6 357 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm8871F7AXK2 190 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Vmn1r170K7N6W9 304 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Vmn1r57K7N731 310 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gpr52P0C5J4 361 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 GifP52787 417 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 CdaP56389 146 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Snai2P97469 269 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Klf2Q60843 354 aaKnown RBP17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Cachd1Q6PDJ1 1288 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Pck2Q8BH04 640 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Tnfsfm13Q8BXS2 410 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Ubac2Q8R1K1 345 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Chmp1aQ921W0 196 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Sntb1Q99L88 537 aaKnown RBP17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Sh3bgrlQ9JJU8 114 aaKnown RBP17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 AireQ9Z0E3 552 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr576A0A0G2JFH3 312 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr1055A2AVX9 346 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr727A2RTN7 324 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Ceacam16E9QA28 426 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 OpcmlG5E8G3 345 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gabrg2P22723 474 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Kcnn3P58391 732 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 ShhQ62226 437 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Psmf1Q8BHL8 271 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Nudt16l1Q8VHN8 211 aaKnown RBP17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Kti12Q9D1R2 351 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Q9D4G1 230 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Mllt1Q9ERL0 547 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Pde7bQ9QXQ1 446 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Mfap5Q9QZJ6 164 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr545Q9WU94 316 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Oc90Q9Z0L3 485 aa17.01■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm45711E0CXA2 391 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Vmn1r88E9Q235 316 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm21833J3QPK1 500 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 TpbpaP13438 124 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Csrp2P97314 193 aaKnown RBP17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 G6pd2P97324 513 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Them4Q3UUI3 230 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 C1rlQ3UZ09 482 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Mtcp1Q60945 107 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Plpp1Q61469 283 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Grm7Q68ED2 915 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 LcorQ6ZPI3 433 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Hbq1aQ8BYM1 145 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Tm6sf2Q8R1J1 378 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Nsa2Q9CR47 260 aaKnown RBP17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Slc15a1Q9JIP7 709 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Cryba2Q9JJV1 197 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Skp1Q9WTX5 163 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Trbv23A0A0A6YWQ1 115 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr1130A0A1L1SQT2 314 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr1255A2AUA4 310 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr1129A2AV41 314 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gpr155A2AWR3 868 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr618K7N6B3 318 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Lyl1P27792 278 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Slc5a6Q5U4D8 634 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Ltc4sQ60860 150 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Nup62Q63850 526 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Rps27Q6ZWU9 84 aaKnown RBP17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr1115Q7TR53 326 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Kansl1Q80TG1 1036 aaKnown RBP17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 2610318N02RikQ80VT5 305 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Nudt9Q8BVU5 350 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 SrrdQ8K2M3 249 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Mrgpra3Q91WW3 302 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Dnttip1Q99LB0 328 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Rita1Q9D1H0 253 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Slc2a8Q9JIF3 477 aa17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 MyofQ69ZN7 2048 aaKnown RBP17■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Igkv9-124A0A0G2JDR3 117 aa16.99■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm5788A0A1Y7VK80 144 aa16.99■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm2022A0A1Y7VLT7 144 aa16.99■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Fam83cA2ARK0 776 aa16.99■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Olfr1205A2ATJ7 307 aa16.99■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm5407E9Q7Q1 248 aa16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms