RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PHYHD1Q5SRE7 291 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 SLC25A30Q5SVS4 291 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 RIPPLY2Q5TAB7 128 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 LCN1P1Q5VSP4 162 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 AADACL4Q5VUY2 407 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 MEDAGQ5VYS4 303 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 NXNL2Q5VZ03 156 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 LAIR2Q6ISS4 152 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 VWA1Q6PCB0 445 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 DNM1P34Q6PK57 102 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 PHC2Q8IXK0 858 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF100Q8IYN0 542 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF786Q8N393 782 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 GPR137CQ8N3F9 429 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 NAXEQ8NCW5 288 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 PROKR2Q8NFJ6 384 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 OR6K3Q8NGY3 331 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 OR2T4Q8NH00 348 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 PIGTQ969N2 578 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 APH1AQ96BI3 265 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 NMD3Q96D46 503 aaKnown RBP8.27□□□□□ -1.09
PHGDH-228ENST00000641847 Q96MT0 163 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 ZFP3Q96NJ6 502 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 TSSK2Q96PF2 358 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 ALKBH3Q96Q83 286 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-228ENST00000641847 MRPL13Q9BYD1 178 aaKnown RBP8.27□□□□□ -1.09
PHGDH-228ENST00000641847 NUAK2Q9H093 628 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 OR51V1Q9H2C8 321 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 RERGLQ9H628 205 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 PLEKHF2Q9H8W4 249 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 PARPBPQ9NWS1 579 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 ASB6Q9NWX5 421 aa8.27□□□□□ -1.09
PHGDH-228ENST00000641847 MED12LQ86YW9 2145 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 IGLV1-36A0A0B4J1U3 117 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 IGKV1D-43A0A0B4J1Z2 117 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 OR6C65A6NJZ3 312 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SNTNA6NMZ2 147 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SLC1A7O00341 560 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 DCTN6O00399 190 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 PRODHO43272 600 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SLC16A7O60669 478 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 FAM20BO75063 409 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 UPK3AO75631 287 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 TNFSF13O75888 250 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 F12P00748 615 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-228ENST00000641847 IL2RAP01589 272 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 IGHV3-9P01782 118 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 CRHP06850 196 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 QDPRP09417 244 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SLC2A5P22732 501 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 CRABP1P29762 137 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 KIR2DL2P43627 348 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-228ENST00000641847 OR3A2P47893 321 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF91Q05481 1191 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 HIST3H3Q16695 136 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SLC35D3Q5M8T2 416 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 C6orf141Q5SZD1 244 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 THEM4Q5T1C6 240 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 TSPO2Q5TGU0 170 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 MEPCEQ7L2J0 689 aaKnown RBP8.26□□□□□ -1.09
PHGDH-228ENST00000641847 KRTAP1-3Q8IUG1 177 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 LIX1LQ8IVB5 337 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 OR6V1Q8N148 313 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 CIARTQ8N365 385 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-228ENST00000641847 OR51L1Q8NGJ5 315 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 OR6K6Q8NGW6 343 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 FNDC8Q8TC99 324 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 NSMAFQ92636 917 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 PTP4A1Q93096 173 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 RFKQ969G6 155 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 MCHR2Q969V1 340 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 RBP7Q96R05 134 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SFXN3Q9BWM7 321 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 ULBP2Q9BZM5 246 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 LINC00470Q9BZP3 86 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 RACGAP1Q9H0H5 632 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SLCO5A1Q9H2Y9 848 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SRA1Q9HD15 236 aaKnown RBP8.26□□□□□ -1.09
PHGDH-228ENST00000641847 B3GAT2Q9NPZ5 323 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 GLTPQ9NZD2 209 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 H2AFY2Q9P0M6 372 aaPredicted RBP8.26□□□□□ -1.09
PHGDH-228ENST00000641847 PRSS50Q9UI38 385 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 FKBP7Q9Y680 259 aa8.26□□□□□ -1.09
PHGDH-228ENST00000641847 SONP18583 2426 aaKnown RBP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 CUBNO60494 3623 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 A0A1W2PPL8 197 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 SH3D21A4FU49 640 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 SLC22A31A6NKX4 558 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 ZNF587BE7ETH6 402 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 KHDRBS3O75525 346 aaKnown RBP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 SMNDC1O75940 238 aaKnown RBP eCLIP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 KRT33AO76009 404 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 GLCEO94923 617 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 GPANK1O95872 356 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 DBTP11182 482 aaKnown RBP8.25□□□□□ -1.09
PHGDH-228ENST00000641847 BMP5P22003 454 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 CTSSP25774 331 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 GSTT1P30711 240 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 HTR1FP30939 366 aa8.25□□□□□ -1.09
PHGDH-228ENST00000641847 CEACAM8P31997 349 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms