RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 DNM1P34Q6PK57 102 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 ZNF813Q6ZN06 617 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 ZNRF4Q8WWF5 429 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 PTP4A1Q93096 173 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 SLC38A2Q96QD8 506 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 TEX12Q9BXU0 123 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 MED20Q9H944 212 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 SRA1Q9HD15 236 aaKnown RBP16.47■□□□□ 0.23
CCDC9-205ENST00000600117 HINT3Q9NQE9 182 aaKnown RBP16.47■□□□□ 0.23
CCDC9-205ENST00000600117 DLL4Q9NR61 685 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 FAM118AQ9NWS6 357 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 NDRG4Q9ULP0 352 aaKnown RBP16.47■□□□□ 0.23
CCDC9-205ENST00000600117 COA3Q9Y2R0 106 aaPredicted RBP16.47■□□□□ 0.23
CCDC9-205ENST00000600117 SLC25A15Q9Y619 301 aa16.47■□□□□ 0.23
CCDC9-205ENST00000600117 SCG5P05408 212 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 CLUP10909 449 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 HOXB1P14653 301 aaPredicted RBP16.46■□□□□ 0.23
CCDC9-205ENST00000600117 PEX19P40855 299 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 NRN1LQ496H8 165 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 SEZ6L2Q6UXD5 910 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 P2RY8Q86VZ1 359 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 SLC22A24Q8N4F4 322 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 FOXN4Q96NZ1 517 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 PRRG3Q9BZD7 231 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 RERGLQ9H628 205 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 SLC24A3Q9HC58 644 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 ZNF224Q9NZL3 707 aa16.46■□□□□ 0.23
CCDC9-205ENST00000600117 ARPC4-TTLL3A0A0A6YYG9 625 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 A0A1W2PPL8 197 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 A0A1W2PR80 420 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 SH3D21A4FU49 640 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 ZNF503-AS2A6NEH8 195 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 TUBAL3A6NHL2 446 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 FAM171A2A8MVW0 826 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 SLC16A6O15403 523 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 GPANK1O95872 356 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 GYPBP06028 91 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 GAAP10253 952 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 SPI1P17947 270 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 NPR2P20594 1047 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 LAP3P28838 519 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 PYCR1P32322 319 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 PLBD1Q6P4A8 553 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 CPOQ8IVL8 374 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 GLB1L2Q8IW92 636 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 SKA3Q8IX90 412 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 TCEANCQ8N8B7 351 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 OR2T4Q8NH00 348 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 HSD17B8Q92506 261 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 PLEKHA8Q96JA3 519 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 SIAEQ9HAT2 523 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 POLE4Q9NR33 117 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 CRIM1Q9NZV1 1036 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 NDRG3Q9UGV2 375 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 AMDHD2Q9Y303 409 aa16.45■□□□□ 0.22
CCDC9-205ENST00000600117 ATRQ13535 2644 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 PRR23D1E9PI22 279 aaPredicted RBP16.44■□□□□ 0.22
CCDC9-205ENST00000600117 PRR23D2P0DMB1 279 aaPredicted RBP16.44■□□□□ 0.22
CCDC9-205ENST00000600117 OR8G3PP0DMU2 310 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 PAICSP22234 425 aaKnown RBP16.44■□□□□ 0.22
CCDC9-205ENST00000600117 KIR2DL3P43628 341 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 PTDSS1P48651 473 aaKnown RBP16.44■□□□□ 0.22
CCDC9-205ENST00000600117 TUBA1BP68363 451 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 TUBA4AP68366 448 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 KCNMB1Q16558 191 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 SGCAQ16586 387 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 C1QTNF12Q5T7M4 302 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 LINC01590Q5TEZ4 76 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 FAM27BQ5VT28 67 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 FBXW10Q5XX13 1052 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 TUBA1AQ71U36 451 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 CXXC5Q7LFL8 322 aaKnown RBP16.44■□□□□ 0.22
CCDC9-205ENST00000600117 BBS1Q8NFJ9 593 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 OR52N5Q8NH56 324 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 FGFBP3Q8TAT2 258 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 TMEM163Q8TC26 289 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 ZC3HAV1LQ96H79 300 aaKnown RBP16.44■□□□□ 0.22
CCDC9-205ENST00000600117 DACH2Q96NX9 599 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 SH3GL3Q99963 347 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 MED18Q9BUE0 208 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 SEC61A2Q9H9S3 476 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 OBP2BQ9NPH6 170 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 B3GNT2Q9NY97 397 aa16.44■□□□□ 0.22
CCDC9-205ENST00000600117 FN1P02751 2386 aaKnown RBP16.43■□□□□ 0.22
CCDC9-205ENST00000600117 LOC100130705A0A1B0GUX0 176 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 TLX2O43763 284 aaPredicted RBP16.43■□□□□ 0.22
CCDC9-205ENST00000600117 MPZL1O95297 269 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 TFP02787 698 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 MSR1P21757 451 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 SLC2A5P22732 501 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 ADARB1P78563 741 aaKnown RBP16.43■□□□□ 0.22
CCDC9-205ENST00000600117 ENDOGQ14249 297 aaKnown RBP16.43■□□□□ 0.22
CCDC9-205ENST00000600117 PPA1Q15181 289 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 AADACL4Q5VUY2 407 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 OTPQ5XKR4 325 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 UGT2A3Q6UWM9 527 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 LYPD4Q6UWN0 246 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 PROKR2Q8NFJ6 384 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 SLC26A10Q8NG04 563 aa16.43■□□□□ 0.22
CCDC9-205ENST00000600117 OR51L1Q8NGJ5 315 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms