RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 APCP25054 2843 aa11.92□□□□□ -0.5
VMP1-217ENST00000593168 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 A0A1W2PQL4 384 aaPredicted RBP11.91□□□□□ -0.5
VMP1-217ENST00000593168 ZNF670-ZNF695F2Z2N8 137 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 PHYHO14832 338 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 SLC43A1O75387 559 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 WISP2O76076 250 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 AQP8O94778 261 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 HLA-DQA2P01906 255 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 QDPRP09417 244 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 GAAP10253 952 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 LAP3P28838 519 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 SELENOPP49908 381 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 HCCSP53701 268 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 C3AR1Q16581 482 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 C10orf128Q5T292 105 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 CARD17Q5XLA6 110 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 LRFN4Q6PJG9 635 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 LYPD4Q6UWN0 246 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 CDC20BQ86Y33 519 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 CLVS1Q8IUQ0 354 aaPredicted RBP11.91□□□□□ -0.5
VMP1-217ENST00000593168 SYS1Q8N2H4 156 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 ZNF454Q8N9F8 522 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 SLC26A10Q8NG04 563 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 ZNF420Q8TAQ5 688 aaPredicted RBP11.91□□□□□ -0.5
VMP1-217ENST00000593168 SMAP2Q8WU79 429 aaPredicted RBP11.91□□□□□ -0.5
VMP1-217ENST00000593168 SPRYD4Q8WW59 207 aaPredicted RBP11.91□□□□□ -0.5
VMP1-217ENST00000593168 GATAD2BQ8WXI9 593 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 GPR137Q96N19 417 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 TBX5Q99593 518 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 WDR76Q9H967 626 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 PARPBPQ9NWS1 579 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 AKAP9Q99996 3911 aa11.91□□□□□ -0.5
VMP1-217ENST00000593168 PDZD2O15018 2839 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 A0A1B0GTH9 108 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 SLC22A20A6NK97 555 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 AHRRA9YTQ3 701 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 CCRL2O00421 344 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ZNF593O00488 134 aaPredicted RBP11.9□□□□□ -0.5
VMP1-217ENST00000593168 GPANK1O95872 356 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 MT-ND5P03915 603 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 YES1P07947 543 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 HSMCR30P0CW71 290 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 FCGR2AP12318 317 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ZNF823P16415 610 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 CD36P16671 472 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ALOX5APP20292 161 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 NTF4P34130 210 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 LIPAP38571 399 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 CD79BP40259 229 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ENTPD1P49961 510 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 TMBIM6P55061 237 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ACTA2P62736 377 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ACTG2P63267 376 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 BDH1Q02338 343 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 TPBGQ13641 420 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 DOC2BQ14184 412 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 SF3B4Q15427 424 aaKnown RBP eCLIP11.9□□□□□ -0.54e-8■■■■■ 30.2
VMP1-217ENST00000593168 KCNMB1Q16558 191 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 PCK2Q16822 640 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 CDONQ4KMG0 1287 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 GPR107Q5VW38 600 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ZNF324BQ6AW86 544 aaPredicted RBP11.9□□□□□ -0.5
VMP1-217ENST00000593168 FAM180AQ6UWF9 173 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 KCTD20Q7Z5Y7 419 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ANKRD13BQ86YJ7 626 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 OR6N2Q8NGY6 317 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 OTOSQ8NHW6 89 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 NSMAFQ92636 917 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 MARVELD3Q96A59 401 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 ZNF775Q96BV0 537 aaPredicted RBP11.9□□□□□ -0.5
VMP1-217ENST00000593168 OPALINQ96PE5 141 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 FUNDC2Q9BWH2 189 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 GLRX2Q9NS18 164 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 BABAM2Q9NXR7 383 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 RSL24D1Q9UHA3 163 aaKnown RBP11.9□□□□□ -0.5
VMP1-217ENST00000593168 COPS3Q9UNS2 423 aa11.9□□□□□ -0.5
VMP1-217ENST00000593168 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
VMP1-217ENST00000593168 CSMD2Q7Z408 3487 aa11.9□□□□□ -0.51
VMP1-217ENST00000593168 CCDC160A6NGH7 325 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 OR6C65A6NJZ3 312 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 DHHO43323 396 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 TMCC2O75069 709 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 MRPL33O75394 65 aaKnown RBP11.89□□□□□ -0.51
VMP1-217ENST00000593168 CPEP16870 476 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 TGFBR2P37173 567 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 RGS6P49758 472 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 ADAM8P78325 824 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 TSTQ16762 297 aaKnown RBP11.89□□□□□ -0.51
VMP1-217ENST00000593168 PHYHD1Q5SRE7 291 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 ZNF684Q5T5D7 378 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 RIPPLY2Q5TAB7 128 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 PLEKHG7Q6ZR37 379 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 FOXL2NBQ6ZUU3 175 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 SSX6Q7RTT6 188 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 DPY19L4Q7Z388 723 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 MCEMP1Q8IX19 187 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 RAB2BQ8WUD1 216 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 SNX33Q8WV41 574 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 C11orf40Q8WZ69 217 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms