RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CDK20Q8IZL9 346 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 CLDN22Q8N7P3 220 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 ARIH2OSQ8N7S6 290 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 OR4K5Q8NGD3 323 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 NABP1Q96AH0 204 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 GPX7Q96SL4 187 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-211ENST00000590499 GPA33Q99795 319 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 SMR3AQ99954 134 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 SH3GL3Q99963 347 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 BARX1Q9HBU1 254 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-211ENST00000590499 IL1RAPQ9NPH3 570 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 FBXL3Q9UKT7 428 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 SIGLEC7Q9Y286 467 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 ADAM18Q9Y3Q7 739 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 HIVEP2P31629 2446 aa9.68□□□□□ -0.86
SMAD4-211ENST00000590499 YLPM1P49750 1951 aaKnown RBP9.67□□□□□ -0.86
SMAD4-211ENST00000590499 A6NIZ1 184 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 MGRN1O60291 552 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 FARS2O95363 451 aaKnown RBP9.67□□□□□ -0.86
SMAD4-211ENST00000590499 RAB36O95755 333 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 SERPINA5P05154 406 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 FABP3P05413 133 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 OR4A8P0C604 315 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 NR2C1P13056 603 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 NR4A1P22736 598 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 THBS4P35443 961 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 SERPINF1P36955 418 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 MAGEA2P43356 314 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF84P51523 738 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 RAP1BP61224 184 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 RAP1AP62834 184 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 ERVK-25P63136 954 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 CD47Q08722 323 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 RAB39AQ14964 217 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 MSMPQ1L6U9 139 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 MTX3Q5HYI7 312 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 THEM4Q5T1C6 240 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 LCN8Q6JVE9 175 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 CYP2R1Q6VVX0 501 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 RRM2BQ7LG56 351 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 DPPA2Q7Z7J5 298 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 OR52J3Q8NH60 311 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 FNDC8Q8TC99 324 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 FBXO17Q96EF6 278 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 RSRC1Q96IZ7 334 aaKnown RBP9.67□□□□□ -0.86
SMAD4-211ENST00000590499 C1orf21Q9H246 121 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 MUC13Q9H3R2 512 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 PLK3Q9H4B4 646 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 SIAEQ9HAT2 523 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 TAS2R1Q9NYW7 299 aa9.67□□□□□ -0.86
SMAD4-211ENST00000590499 PRPF19Q9UMS4 504 aaKnown RBP9.67□□□□□ -0.86
SMAD4-211ENST00000590499 TMEM129A0AVI4 362 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 B9A039 149 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 NDUFB2O95178 105 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 GADD45GO95257 159 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 NPR2P20594 1047 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 RRM2P31350 389 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 CDAP32320 146 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 RIPPLY3P57055 190 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 SMIM11AP58511 58 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 SNRPD2P62316 118 aaKnown RBP9.66□□□□□ -0.86
SMAD4-211ENST00000590499 MS4A2Q01362 244 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 SPIBQ01892 262 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 CHRNB3Q05901 458 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 SNTB2Q13425 540 aaKnown RBP9.66□□□□□ -0.86
SMAD4-211ENST00000590499 TRIM25Q14258 630 aaKnown RBP9.66□□□□□ -0.86
SMAD4-211ENST00000590499 SLC36A2Q495M3 483 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 MESTQ5EB52 335 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 VHLLQ6RSH7 139 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 SLC16A14Q7RTX9 510 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 TRPM8Q7Z2W7 1104 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 ZER1Q7Z7L7 766 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 ZDHHC21Q8IVQ6 265 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 PAQR4Q8N4S7 273 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-211ENST00000590499 OR10H5Q8NGA6 315 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 BCAS4Q8TDM0 211 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 NSMAFQ92636 917 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 MCUR1Q96AQ8 359 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 Q96M85 177 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 KRTAP4-11Q9BYQ6 195 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 NRIP3Q9NQ35 241 aa9.66□□□□□ -0.86
SMAD4-211ENST00000590499 A0A096LNT2 108 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-211ENST00000590499 SLC22A23A1A5C7 686 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 PRSS37A4D1T9 235 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 UNC119BA6NIH7 251 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 H7C1C5 153 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 AHCYL1O43865 530 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 SSX4O60224 188 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 GPRIN2O60269 458 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 TXNDC12O95881 172 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 IGFBP1P08833 259 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-211ENST00000590499 FPR3P25089 353 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 GLRXP35754 106 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 RPL4P36578 427 aaKnown RBP9.65□□□□□ -0.86
SMAD4-211ENST00000590499 EFNA4P52798 201 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 HMGA2P52926 109 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 LCN6P62502 163 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 KRTAP1-1Q07627 177 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 KRR1Q13601 381 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms