RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF432O94892 652 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 CD8AP01732 235 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 MBP02144 154 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 SOD3P08294 240 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 TCEA2Q15560 299 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 CDNFQ49AH0 187 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 CLEC1AQ8NC01 280 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 APCDD1LQ8NCL9 501 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 OR5AR1Q8NGP9 310 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 TMEM239Q8WW34 195 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 NEU1Q99519 415 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 PIAS3Q9Y6X2 628 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 PLXNA3P51805 1871 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 RTTNQ86VV8 2226 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 IGLV3-16A0A075B6K0 115 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 BLOC1S5-TXNDC5H3BN57 136 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 SOCS5O75159 536 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 HCKP08631 526 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 RAB40ALP0C0E4 278 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 CD96P40200 585 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
CIRBP-228ENST00000590347 S100A10P60903 97 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 CXADRP78310 365 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 ID2Q02363 134 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF345Q14585 488 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 TMEM244Q5VVB8 128 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 MITD1Q8WV92 249 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 RAB40AQ8WXH6 277 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 VWCEQ96DN2 955 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 CNRIP1Q96F85 164 aaPredicted RBP13.77□□□□□ -0.21
CIRBP-228ENST00000590347 OPA3Q9H6K4 179 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 IKZF2Q9UKS7 526 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 SLC35A3Q9Y2D2 325 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 IER3IP1Q9Y5U9 82 aa13.77□□□□□ -0.21
CIRBP-228ENST00000590347 HOXA2O43364 376 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 XRCC3O43542 346 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 GPANK1O95872 356 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 ITGB2P05107 769 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 HSD17B7P56937 341 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 TAS2R38P59533 333 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 RELQ04864 619 aaPredicted RBP13.76□□□□□ -0.21
CIRBP-228ENST00000590347 SLC9A3R2Q15599 337 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 PRAMEF14Q5SWL7 426 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 OR13C9Q8NGT0 318 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF563Q8TA94 476 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 TMEM106AQ96A25 262 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 CMBLQ96DG6 245 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 PTCHD1Q96NR3 888 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 PRSS27Q9BQR3 290 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 PLA2G2EQ9NZK7 142 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 KCNG2Q9UJ96 466 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 REV3LO60673 3130 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 CHD9Q3L8U1 2897 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 COL4A4P53420 1690 aaPredicted RBP13.76□□□□□ -0.21
CIRBP-228ENST00000590347 A0A1B0GTI1 187 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 A0A1W2PRU2 124 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 TVP23AA6NH52 213 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 PEX12O00623 359 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 APLNRP35414 380 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 KHDC3LQ587J8 217 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 SPRED2Q7Z698 418 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 OR2AP1Q8NGE2 309 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 OR13C8Q8NGS7 320 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 CNN2Q99439 309 aaKnown RBP13.76□□□□□ -0.21
CIRBP-228ENST00000590347 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF281Q9Y2X9 895 aa13.76□□□□□ -0.21
CIRBP-228ENST00000590347 HEATR5AQ86XA9 2040 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 SNAPC5O75971 98 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 POP4O95707 220 aaKnown RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 CD14P08571 375 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 HIST1H1BP16401 226 aaKnown RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 CSNK1EP49674 416 aaKnown RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 TMEM115Q12893 351 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 RPL22L1Q6P5R6 122 aaKnown RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF793Q6ZN11 406 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 TMEM150AQ86TG1 271 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 CPNE4Q96A23 557 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ARHGDIGQ99819 225 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 OR2AG1Q9H205 316 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 C8orf33Q9H7E9 229 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 OR51B4Q9Y5P0 310 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ELOA3DA6NLF2 546 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF749O43361 778 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 LILRB5O75023 590 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 LEFTY1O75610 366 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 WNT11O96014 354 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ITGA5P08648 1049 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 HOXB5P09067 269 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 HOXA5P20719 270 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 RPL4P36578 427 aaKnown RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 RIPPLY1Q0D2K3 151 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 SMAD4Q13485 552 aaKnown RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ELOA3BQ3SY89 546 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 MOGAT2Q3SYC2 334 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 VWA2Q5GFL6 755 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 MFSD12Q6NUT3 480 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 NRROSQ86YC3 692 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 CBARPQ8N350 705 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 NUP43Q8NFH3 380 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms