RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ROR2Q01974 943 aaKnown RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 GALEQ14376 348 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 KCNMB1Q16558 191 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 CEACAM16Q2WEN9 425 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 RIPPLY2Q5TAB7 128 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 UBE2UQ5VVX9 321 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 OR2A2Q6IF42 318 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 DPY19L4Q7Z388 723 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 SATL1Q86VE3 508 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 MED12LQ86YW9 2145 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 LINC00346Q8IVM7 164 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 ZNF100Q8IYN0 542 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 NAXEQ8NCW5 288 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 SPRYD4Q8WW59 207 aaPredicted RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 MND1Q9BWT6 205 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 YIPF3Q9GZM5 350 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 TP63Q9H3D4 680 aaPredicted RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 ISG20L2Q9H9L3 353 aaKnown RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 B3GAT2Q9NPZ5 323 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 POLE4Q9NR33 117 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 INPP5EQ9NRR6 644 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 CHCHD3Q9NX63 227 aaKnown RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 SH3BGRL2Q9UJC5 107 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 TINAGQ9UJW2 476 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 ERGIC3Q9Y282 383 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 EMC9Q9Y3B6 208 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 ALPK2Q86TB3 2170 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 ZNF99A8MXY4 864 aaPredicted RBP9.95□□□□□ -0.82
VMP1-207ENST00000588131 ZNF670-ZNF695F2Z2N8 137 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 PSMD9O00233 223 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 TNFSF13O75888 250 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 KRT33AO76009 404 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 LALBAP00709 142 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 HRGP04196 525 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 TMIGD3P0DMS9 266 aaPredicted RBP9.95□□□□□ -0.82
VMP1-207ENST00000588131 GLI4P10075 376 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 ZNF823P16415 610 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 ALOX5APP20292 161 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 PSMB9P28065 219 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 ZNF84P51523 738 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 RBPJQ06330 500 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 RAB39AQ14964 217 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 MED22Q15528 200 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 SGCAQ16586 387 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 PCK2Q16822 640 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 TP53I3Q53FA7 332 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 TEX30Q5JUR7 227 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 C9orf135Q5VTT2 229 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 CORO6Q6QEF8 472 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 ZNF322Q6U7Q0 402 aaPredicted RBP9.95□□□□□ -0.82
VMP1-207ENST00000588131 TFAP2EQ6VUC0 442 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 NCCRP1Q6ZVX7 275 aaPredicted RBP9.95□□□□□ -0.82
VMP1-207ENST00000588131 ZNF367Q7RTV3 350 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 UBE2J2Q8N2K1 259 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 KLHL36Q8N4N3 616 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 CNEP1R1Q8N9A8 125 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 ZNF485Q8NCK3 441 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 OR10H5Q8NGA6 315 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 OR6K3Q8NGY3 331 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 OTOSQ8NHW6 89 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 GATAD2BQ8WXI9 593 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 RORBQ92753 470 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 TTYH2Q9BSA4 534 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 VCX3AQ9NNX9 186 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 TMEM38BQ9NVV0 291 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 UPB1Q9UBR1 384 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 DOCK7Q96N67 2140 aa9.95□□□□□ -0.82
VMP1-207ENST00000588131 ATMQ13315 3056 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 GTF3C1Q12789 2109 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 DPPA5A6NC42 116 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 OR6C65A6NJZ3 312 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 ZNF587BE7ETH6 402 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 RPL36A-HNRNPH2H7BZ11 118 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 HOXD4P09016 255 aaPredicted RBP9.94□□□□□ -0.82
VMP1-207ENST00000588131 B4GALT1P15291 398 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 MSR1P21757 451 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 CEACAM8P31997 349 aaPredicted RBP9.94□□□□□ -0.82
VMP1-207ENST00000588131 TIMP3P35625 211 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 PER3P56645 1201 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 WNT4P56705 351 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 OR12D2P58182 307 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 MRPS34P82930 218 aaKnown RBP9.94□□□□□ -0.82
VMP1-207ENST00000588131 ARF1P84077 181 aaKnown RBP9.94□□□□□ -0.82
VMP1-207ENST00000588131 FAPQ12884 760 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 EIF2B1Q14232 305 aaKnown RBP9.94□□□□□ -0.82
VMP1-207ENST00000588131 ENDOGQ14249 297 aaKnown RBP9.94□□□□□ -0.82
VMP1-207ENST00000588131 SPHARQ15513 63 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 CDONQ4KMG0 1287 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 ZNF684Q5T5D7 378 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 SYT6Q5T7P8 510 aaPredicted RBP9.94□□□□□ -0.82
VMP1-207ENST00000588131 FBXW9Q5XUX1 488 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 BTLAQ7Z6A9 289 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 ST6GALNAC3Q8NDV1 305 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 OR52N1Q8NH53 320 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 THEM6Q8WUY1 208 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 FCGR1BQ92637 280 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 STARD4Q96DR4 205 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 C4orf36Q96KX1 117 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 MNTQ99583 582 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 FOXB1Q99853 325 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms