RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SNNO75324 88 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 VPS26AO75436 327 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SCO1O75880 301 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SULT1C4O75897 302 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 MMP23AO75900 390 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SLC16A8O95907 504 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PCCAP05165 728 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RBP1P09455 135 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 HOXB7P09629 217 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 NBEAP1P0C6P0 100 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ZDHHC11BP0C7U3 371 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SLC35E2BP0CK96 405 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 THRAP10827 490 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ETS2P15036 469 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 AREGP15514 252 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 CYP11B1P15538 503 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RPA2P15927 270 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 DTYMKP23919 212 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 OTX2P32243 289 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 MAS1LP35410 378 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 CEACAM3P40198 252 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 MAP3K8P41279 467 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 NSFP46459 744 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 STK19P49842 368 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 CEBPGP53567 150 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ATP5IP56385 69 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 NUTF2P61970 127 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ARF6P62330 175 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RPS15P62841 145 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 GNGT1P63211 74 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 TNNC1P63316 161 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 MGAT3Q09327 533 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SLAMF1Q13291 335 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SLC39A6Q13433 755 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 C16orf72Q14CZ0 275 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PDK3Q15120 406 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PDK4Q16654 411 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SLC36A3Q495N2 470 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SPANXN2Q5MJ10 180 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 LDLRAP1Q5SW96 308 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PDZK1Q5T2W1 519 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PRAMEF8Q5VWM4 474 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ELP2Q6IA86 826 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RTL6Q6ICC9 239 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 APOBEC3HQ6NTF7 200 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RPL13AP3Q6NVV1 102 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 TMEM220Q6QAJ8 160 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ATRAIDQ6UW56 229 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 CLEC18BQ6UXF7 455 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ASCL4Q6XD76 172 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 CERS6Q6ZMG9 384 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 TMEM26Q6ZUK4 368 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PRSS42Q7Z5A4 293 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ABHD12BQ7Z5M8 362 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ZNF410Q86VK4 478 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 HORMAD1Q86X24 394 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PHF13Q86YI8 300 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PUSL1Q8N0Z8 303 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 C4orf33Q8N1A6 199 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RIBC1Q8N443 379 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ARRDC1Q8N5I2 433 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 COLGALT1Q8NBJ5 622 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ACBD4Q8NC06 268 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 FAM83FQ8NEG4 500 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PSMA8Q8TAA3 256 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 GPX8Q8TED1 209 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 C22orf15Q8WYQ4 148 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 UFD1Q92890 307 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 C18orf25Q96B23 403 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 TCEAL4Q96EI5 215 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 C14orf144Q96I85 54 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ZNF641Q96N77 438 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RILPQ96NA2 401 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 SERPINB12Q96P63 405 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 TEAD3Q99594 435 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 EBNA1BP2Q99848 306 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 NAT9Q9BTE0 207 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ANKRD60Q9BZ19 345 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ZNF350Q9GZX5 532 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RAB1BQ9H0U4 201 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 NXF3Q9H4D5 531 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 KAT8Q9H7Z6 458 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 FN3KRPQ9HA64 309 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ZFP14Q9HCL3 533 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 CSNK1G1Q9HCP0 422 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 RWDD2AQ9UIY3 292 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 GUCA1BQ9UMX6 200 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 PSMD13Q9UNM6 376 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 TP53TG5Q9Y2B4 290 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 HYOU1Q9Y4L1 999 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 TBL2Q9Y4P3 447 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 WIF1Q9Y5W5 379 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 ABCC4O15439 1325 aa2.62□□□□□ -1.99
SMCHD1-202ENST00000577300 NUP155O75694 1391 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 CCDC7Q96M83 1385 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 RTEL1-TNFRSF6BF6WH68 1400 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 BCL9O00512 1426 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 NUP160Q12769 1436 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 PTCH1Q13635 1447 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ADGRL3Q9HAR2 1447 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms