RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SDR9C7Q8NEX9 313 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 SLC26A10Q8NG04 563 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 NINJ1Q92982 152 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 FBXO17Q96EF6 278 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 TSSK2Q96PF2 358 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 SH3GL3Q99963 347 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 SEMA6AQ9H2E6 1030 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 SEC61A2Q9H9S3 476 aa11.66□□□□□ -0.54
CDH1-204ENST00000562118 ABCD4O14678 606 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 HS3ST1O14792 307 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 SNAP29O95721 258 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 RENP00797 406 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 SERPINA5P05154 406 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 CELA3BP08861 270 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 NOS3P29474 1203 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 RAB1AP62820 205 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 CRMP1Q14194 572 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 GINS1Q14691 196 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 SLC36A2Q495M3 483 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 SLC35F1Q5T1Q4 408 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 LINC01590Q5TEZ4 76 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 C12orf73Q69YU5 71 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 DNM1P34Q6PK57 102 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 TMEM200AQ86VY9 491 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 IQCF1Q8N6M8 205 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 ZNF611Q8N823 705 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 IL17RDQ8NFM7 739 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 OR52E2Q8NGJ4 325 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 NSMAFQ92636 917 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 HTRA1Q92743 480 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 CIB1Q99828 191 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 RBM4BQ9BQ04 359 aaKnown RBP11.65□□□□□ -0.54
CDH1-204ENST00000562118 ZNF416Q9BWM5 594 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 GRIP2Q9C0E4 1043 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 MARCH7Q9H992 704 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 KRT84Q9NSB2 600 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 ENOPH1Q9UHY7 261 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 COA3Q9Y2R0 106 aaPredicted RBP11.65□□□□□ -0.54
CDH1-204ENST00000562118 DSCAMO60469 2012 aa11.65□□□□□ -0.54
CDH1-204ENST00000562118 ZNF469Q96JG9 3925 aaPredicted RBP11.64□□□□□ -0.55
CDH1-204ENST00000562118 IGHV2OR16-5A0A0B4J2B6 119 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 H3BN98 237 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 M0R1B8 84 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 MITFO75030 526 aaPredicted RBP11.64□□□□□ -0.55
CDH1-204ENST00000562118 TMCC2O75069 709 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 TFP02787 698 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 DANCRP0C864 163 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 EPHA2P29317 976 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 CALCRP30988 508 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 ALDH3A2P51648 485 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 NKX6-1P78426 367 aaPredicted RBP11.64□□□□□ -0.55
CDH1-204ENST00000562118 HSF2Q03933 536 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 GLO1Q04760 184 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 PTGES3Q15185 160 aaKnown RBP11.64□□□□□ -0.55
CDH1-204ENST00000562118 SLX4IPQ5VYV7 408 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 B3GLCTQ6Y288 498 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 C20orf204Q6ZNR8 217 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 SLC16A14Q7RTX9 510 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 NUP37Q8NFH4 326 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 KBTBD8Q8NFY9 601 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 ZNRF4Q8WWF5 429 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 PTP4A1Q93096 173 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 MBD6Q96DN6 1003 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 WNT5BQ9H1J7 359 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 C1orf198Q9H425 327 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 FN3KQ9H479 309 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 RPRD1BQ9NQG5 326 aaKnown RBP11.64□□□□□ -0.55
CDH1-204ENST00000562118 MRPL22Q9NWU5 206 aaKnown RBP11.64□□□□□ -0.55
CDH1-204ENST00000562118 KIF17Q9P2E2 1029 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 ATPIF1Q9UII2 106 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 KCNG2Q9UJ96 466 aa11.64□□□□□ -0.55
CDH1-204ENST00000562118 RTTNQ86VV8 2226 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 SAC3D1A6NKF1 404 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 ATE1O95260 518 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 IFNGP01579 166 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 HMGN1P05114 100 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 PATE4P0C8F1 98 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 COX5BP10606 129 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 CD79AP11912 226 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 PAX1P15863 534 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 ZNF3P17036 446 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 ZNF32P17041 273 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 SPI1P17947 270 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 CD53P19397 219 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 SLC2A5P22732 501 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 IGFBP5P24593 272 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 GGT2P36268 569 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 CENPAP49450 140 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 IDH3GP51553 393 aaPredicted RBP11.63□□□□□ -0.55
CDH1-204ENST00000562118 PSG4Q00888 419 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 AQP6Q13520 282 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 DAG1Q14118 895 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 KRTAP27-1Q3LI81 207 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 UGT2A3Q6UWM9 527 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 DTX2Q86UW9 622 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 CYB561A3Q8NBI2 242 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 OR2T4Q8NH00 348 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 C11orf40Q8WZ69 217 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 HCAR1Q9BXC0 346 aa11.63□□□□□ -0.55
CDH1-204ENST00000562118 C1QTNF6Q9BXI9 259 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms