RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 SYT4Q9H2B2 425 aa11.86□□□□□ -0.51
CHRNB4-204ENST00000559849 EGLN3Q9H6Z9 239 aa11.86□□□□□ -0.51
CHRNB4-204ENST00000559849 DCLRE1BQ9H816 532 aa11.86□□□□□ -0.51
CHRNB4-204ENST00000559849 IGHV2OR16-5A0A0B4J2B6 119 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 ARRDC5A6NEK1 342 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 OVOL3O00110 214 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 E2F6O75461 281 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 PTHP01270 115 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 CALCRP30988 508 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 ARHGDIAP52565 204 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 RAB39AQ14964 217 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 CD300LDQ6UXZ3 194 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 FOXL2NBQ6ZUU3 175 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 PTCHD4Q6ZW05 846 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 FEVQ99581 238 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 CA10Q9NS85 328 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 NKX1-2Q9UD57 310 aaPredicted RBP11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 A0A1W2PPL8 197 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 SLC16A7O60669 478 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 DEAF1O75398 565 aaPredicted RBP11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 CD8AP01732 235 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 MMP7P09237 267 aaPredicted RBP11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 PAX1P15863 534 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 LAP3P28838 519 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 CRABP1P29762 137 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 PLP2Q04941 152 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 ETFDHQ16134 617 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 CLEC12AQ5QGZ9 265 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 JAZF1Q86VZ6 243 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 NUP37Q8NFH4 326 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 TRAF4Q9BUZ4 470 aaPredicted RBP11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 NUAK2Q9H093 628 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 C1orf198Q9H425 327 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 CCNB1IP1Q9NPC3 277 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 CBLN4Q9NTU7 201 aa11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 ZNF701Q9NV72 531 aaPredicted RBP11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 PDP1Q9P0J1 537 aaPredicted RBP11.85□□□□□ -0.51
CHRNB4-204ENST00000559849 FLNAP21333 2647 aaKnown RBP11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 VSTM5A8MXK1 200 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 KHDRBS3O75525 346 aaKnown RBP11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 CST2P09228 141 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 ZNF35P13682 527 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 HIST1H1CP16403 213 aaKnown RBP11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 CTLA4P16410 223 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 MSR1P21757 451 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 NKX6-1P78426 367 aaPredicted RBP11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 HGFACQ04756 655 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 CCNIQ14094 377 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 RCN1Q15293 331 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 TMEM179BQ7Z7N9 219 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 ZNF584Q8IVC4 421 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 OR4K13Q8NH42 304 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 TRMT61AQ96FX7 289 aaKnown RBP11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 SNX18Q96RF0 628 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 WACQ9BTA9 647 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 RERGLQ9H628 205 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 PAPOLBQ9NRJ5 636 aaKnown RBP11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 ARMC1Q9NVT9 282 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 TEP1Q99973 2627 aaKnown RBP11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 ZNF469Q96JG9 3925 aaPredicted RBP11.84□□□□□ -0.51
CHRNB4-204ENST00000559849 IQCMA0A1B0GVH7 501 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 BHLHE40O14503 412 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 RENP00797 406 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 BMP4P12644 408 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 PCBD1P61457 104 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 SHEQ5VZ18 495 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 LEG1Q6P5S2 330 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 DNM1P34Q6PK57 102 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 SYT9Q86SS6 491 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 GLB1L2Q8IW92 636 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 ALDH16A1Q8IZ83 802 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 FBXO17Q96EF6 278 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 PERPQ96FX8 193 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 DUS3LQ96G46 650 aaKnown RBP11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 NMNAT3Q96T66 252 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 NIPSNAP1Q9BPW8 284 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 PLA2G12AQ9BZM1 189 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 YIPF3Q9GZM5 350 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 ZNF556Q9HAH1 456 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 POLE4Q9NR33 117 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 COA3Q9Y2R0 106 aaPredicted RBP11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 AP4S1Q9Y587 144 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 TIMM10BQ9Y5J6 103 aa11.83□□□□□ -0.51
CHRNB4-204ENST00000559849 ACANP16112 2415 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 ARFGEF3Q5TH69 2177 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 C12orf71A8MTZ7 269 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 TIPRLO75663 272 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 ZNF32P17041 273 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 NR4A1P22736 598 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 PTH2RP49190 550 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 HSF2Q03933 536 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 DAG1Q14118 895 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 PABPC1L2AQ5JQF8 200 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 SLC35F1Q5T1Q4 408 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 SLC30A7Q8NEW0 376 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 NRBF2Q96F24 287 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 TSSK2Q96PF2 358 aa11.83□□□□□ -0.52
CHRNB4-204ENST00000559849 TSC22D3Q99576 134 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms