RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 GLB1L2Q8IW92 636 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 ALDH16A1Q8IZ83 802 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 SLC30A7Q8NEW0 376 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 OR10G2Q8NGC3 310 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 OR4K13Q8NH42 304 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 FBXO17Q96EF6 278 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 DUS3LQ96G46 650 aaKnown RBP9.25□□□□□ -0.93
LINC00239-201ENST00000556973 NMNAT3Q96T66 252 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 NIPSNAP1Q9BPW8 284 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 SYT4Q9H2B2 425 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 RERGLQ9H628 205 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 ZNF442Q9H7R0 627 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 SRA1Q9HD15 236 aaKnown RBP9.25□□□□□ -0.93
LINC00239-201ENST00000556973 POLE4Q9NR33 117 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 ARMC1Q9NVT9 282 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 PDP1Q9P0J1 537 aaPredicted RBP9.25□□□□□ -0.93
LINC00239-201ENST00000556973 BAIAP2Q9UQB8 552 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 TIMM10BQ9Y5J6 103 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 PMF1-BGLAPU3KQ54 211 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 B9A039 149 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 BHLHE40O14503 412 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 DEAF1O75398 565 aaPredicted RBP9.24□□□□□ -0.93
LINC00239-201ENST00000556973 CIB2O75838 187 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 SCG5P05408 212 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 OR4A8P0C604 315 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 ZNF32P17041 273 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 STOMP27105 288 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 THBS4P35443 961 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 GLRXP35754 106 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 CDKN1AP38936 164 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 ERFP50548 548 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 ATP5J2P56134 94 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 LSM6P62312 80 aaKnown RBP9.24□□□□□ -0.93
LINC00239-201ENST00000556973 PSG4Q00888 419 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 HSF2Q03933 536 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 RAB35Q15286 201 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 EFNB3Q15768 340 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 ADIPOQQ15848 244 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 KCNMB1Q16558 191 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 SWI5Q1ZZU3 235 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 TBC1D28Q2M2D7 210 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 MST1LQ2TV78 715 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 PABPC1L2AQ5JQF8 200 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 CLEC12AQ5QGZ9 265 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 KRT80Q6KB66 452 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 LEG1Q6P5S2 330 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 VHLLQ6RSH7 139 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 TMEM179BQ7Z7N9 219 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 LURAP1LQ8IV03 231 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 OR6V1Q8N148 313 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 LNX2Q8N448 690 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 NPEPL1Q8NDH3 523 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 CPEB3Q8NE35 698 aaKnown RBP9.24□□□□□ -0.93
LINC00239-201ENST00000556973 OR52E2Q8NGJ4 325 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 NRBF2Q96F24 287 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 ZNF416Q9BWM5 594 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 TSSK6Q9BXA6 273 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 ZNF556Q9HAH1 456 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 TBC1D23Q9NUY8 699 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 FBXO9Q9UK97 447 aaPredicted RBP9.24□□□□□ -0.93
LINC00239-201ENST00000556973 B9D1Q9UPM9 204 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 COA3Q9Y2R0 106 aaPredicted RBP9.24□□□□□ -0.93
LINC00239-201ENST00000556973 CMAHPQ9Y471 501 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 AP4S1Q9Y587 144 aa9.24□□□□□ -0.93
LINC00239-201ENST00000556973 MAST4O15021 2626 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 NOTCH2Q04721 2471 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 OR6C68A6NDL8 312 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 H7C417 338 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 TIPRLO75663 272 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 SNAP29O95721 258 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 TP53P04637 393 aaPredicted RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 ANXA8P13928 327 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 APEX1P27695 318 aaKnown RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 PCSK6P29122 969 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 APLNRP35414 380 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 RAD52P43351 418 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 EVX1P49640 407 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 UCP2P55851 309 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 SNTB2Q13425 540 aaKnown RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 CCNIQ14094 377 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 ENDOGQ14249 297 aaKnown RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 Q5PR19 223 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 ZNF362Q5T0B9 420 aaPredicted RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 SLC35F1Q5T1Q4 408 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 UGT2A3Q6UWM9 527 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 UNQ6126/PRO20091Q6UXV3 157 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 YTHDF3Q7Z739 585 aaKnown RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 ZBTB46Q86UZ6 589 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 KRTAP1-3Q8IUG1 177 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 WFDC11Q8NEX6 87 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 OR2T33Q8NG76 320 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 OR8D4Q8NGM9 314 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 UTP4Q969X6 686 aaKnown RBP9.23□□□□□ -0.93
LINC00239-201ENST00000556973 TSSK2Q96PF2 358 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 DDOQ99489 341 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 BDH2Q9BUT1 245 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 CACNG6Q9BXT2 260 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 PLA2G12AQ9BZM1 189 aa9.23□□□□□ -0.93
LINC00239-201ENST00000556973 OR2H1Q9GZK4 316 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms