RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 SULT1C4O75897 302 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 SERPINA3P01011 423 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 TACSTD2P09758 323 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 PTGS2P35354 604 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 LHX2P50458 406 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 PPP5CP53041 499 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 CLDN20P56880 219 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 RAC1P63000 192 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 SLC35A1P78382 337 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 EGR3Q06889 387 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 HSPB2Q16082 182 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 TMEM176BQ3YBM2 270 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-204ENST00000540846 HDDC2Q7Z4H3 204 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 FAM220AQ7Z4H9 259 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 CCDC190Q86UF4 302 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 WDFY1Q8IWB7 410 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 TEX19Q8NA77 164 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 OTOSQ8NHW6 89 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 AP3S1Q92572 193 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 ADGRG7Q96K78 797 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 ADAD1Q96M93 576 aaKnown RBP11.1□□□□□ -0.63
SMAD3-204ENST00000540846 SFXN2Q96NB2 322 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 MRPL22Q9NWU5 206 aaKnown RBP11.1□□□□□ -0.63
SMAD3-204ENST00000540846 MRM2Q9UI43 246 aaKnown RBP11.1□□□□□ -0.63
SMAD3-204ENST00000540846 LAMP5Q9UJQ1 280 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 KALRNO60229 2985 aa11.1□□□□□ -0.63
SMAD3-204ENST00000540846 A0A1B0GVC2 190 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 SLC35F4A4IF30 521 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 CENPBD1B2RD01 187 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 ZNF814B7Z6K7 855 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 H0YC42 278 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 CTDSP2O14595 271 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 TFECO14948 347 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-204ENST00000540846 UPK3AO75631 287 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 GPANK1O95872 356 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 OPN1LWP04000 364 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 KRT8P05787 483 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 PSKH1P11801 424 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 CFL1P23528 166 aaKnown RBP11.09□□□□□ -0.63
SMAD3-204ENST00000540846 EDNRAP25101 427 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 CLDN18P56856 261 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 GLO1Q04760 184 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 SLC10A1Q14973 349 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 TMPPEQ6ZT21 453 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 DPY19L4Q7Z388 723 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 UEVLDQ8IX04 471 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 ABHD4Q8TB40 342 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 ASB17Q8WXJ9 295 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 TXNDC15Q96J42 360 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 SLC25A18Q9H1K4 315 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 MED29Q9NX70 200 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 SPRR3Q9UBC9 169 aa11.09□□□□□ -0.63
SMAD3-204ENST00000540846 KMT2BQ9UMN6 2715 aaPredicted RBP11.08□□□□□ -0.64
SMAD3-204ENST00000540846 A0A0J9YW62 118 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 TRBV2A0A0J9YWF9 115 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 ERVH48-1M5A8F1 160 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 SULT2B1O00204 365 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 HLA-DQA2P01906 255 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 OR8G3PP0DMU2 310 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF12P17014 697 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF708P17019 499 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
SMAD3-204ENST00000540846 PSMB10P40306 273 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 STARP49675 285 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 SUCLG1P53597 346 aaKnown RBP11.08□□□□□ -0.64
SMAD3-204ENST00000540846 BIDP55957 195 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 RPS11P62280 158 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMAD3-204ENST00000540846 H3F3AP84243 136 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 FMODQ06828 376 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 ST3GAL2Q16842 350 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 SPANXN2Q5MJ10 180 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 PAMR1Q6UXH9 720 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 PARP16Q8N5Y8 322 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 OXGR1Q96P68 337 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 MRPL13Q9BYD1 178 aaKnown RBP11.08□□□□□ -0.64
SMAD3-204ENST00000540846 PPIL3Q9H2H8 161 aaKnown RBP11.08□□□□□ -0.64
SMAD3-204ENST00000540846 KCNG2Q9UJ96 466 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 CMAHPQ9Y471 501 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 SVILO95425 2214 aa11.08□□□□□ -0.64
SMAD3-204ENST00000540846 TRGV5A0A0B4J1U4 118 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 GJE1A6NN92 205 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 PSMD9O00233 223 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ZNF593O00488 134 aaPredicted RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 DNPH1O43598 174 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 KHDRBS3O75525 346 aaKnown RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 MYL9P24844 172 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 TNFSF8P32971 234 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 TDGF1P3P51864 188 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 NANOS3P60323 173 aaKnown RBP11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ROM1Q03395 351 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 GTF3C1Q12789 2109 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 LY6DQ14210 128 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ETFDHQ16134 617 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 PCK2Q16822 640 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ACSM3Q53FZ2 586 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 ZMAT1Q5H9K5 638 aa11.07□□□□□ -0.64
SMAD3-204ENST00000540846 TEX30Q5JUR7 227 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms