RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SSR2P43308 183 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 GPR4P46093 362 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 GPR143P51810 404 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 NR0B1P51843 470 aaKnown RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 MAZP56270 477 aaKnown RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 FXYD6P3P58550 94 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 MEF2AQ02078 507 aaPredicted RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CBFBQ13951 182 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 FGL2Q14314 439 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 ELOCQ15369 112 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 DEFB133Q30KQ1 61 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 LINC00303Q3SY05 128 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 AMZ1Q400G9 498 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 FAM27D1Q5T7N8 215 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 METRNLQ641Q3 311 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 OR5M10Q6IEU7 315 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 FRRS1Q6ZNA5 592 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 PRSS45Q7RTY3 260 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 AMZ2Q86W34 360 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF547Q8IVP9 402 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 DND1Q8IYX4 353 aaKnown RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 SVBPQ8N300 66 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 OR2L13Q8N349 312 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 DMBX1Q8NFW5 382 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 OR1M1Q8NGA1 313 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 OR4D9Q8NGE8 314 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 LMX1AQ8TE12 382 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM255BQ8WV15 326 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 KLK6Q92876 244 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 SLC25A38Q96DW6 304 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CNRIP1Q96F85 164 aaPredicted RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 PELI1Q96FA3 418 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 LRRC46Q96FV0 321 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 C16orf58Q96GQ5 468 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 COX14Q96I36 57 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CNN2Q99439 309 aaKnown RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CCDC3Q9BQI4 270 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 LRRC61Q9BV99 259 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CHIAQ9BZP6 476 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 NKX6-2Q9C056 277 aaPredicted RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 BARX1Q9HBU1 254 aaPredicted RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 MCCC2Q9HCC0 563 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 KLHL1Q9NR64 748 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CA10Q9NS85 328 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 COA4Q9NYJ1 87 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 COQ3Q9NZJ6 369 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 APOBEC3BQ9UH17 382 aaKnown RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 GPR160Q9UJ42 338 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 TUBD1Q9UJT1 453 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 FBXL2Q9UKC9 423 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 SLC7A7Q9UM01 511 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 ASF1AQ9Y294 204 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CARHSP1Q9Y2V2 147 aaKnown RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 KCNE3Q9Y6H6 103 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF780BQ9Y6R6 833 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 RP1L1Q8IWN7 2480 aaPredicted RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 USP9XQ93008 2570 aaPredicted RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 PIKFYVEQ9Y2I7 2098 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 MYO9AB2RTY4 2548 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 A0A087WV62 115 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 A0A0A6YYH2 397 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TRBV2A0A0J9YWF9 115 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TRBV5-5A0A0J9YX44 114 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 A0A1B0GVC2 190 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 A0A1W2PPV9 198 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM218A2RU14 115 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 RNF222A6NCQ9 220 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 A6NIN4 97 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 A6NJ64 397 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 FAM183AA6NL82 134 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 F8W036 122 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 LGALS8O00214 317 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 OR1F1O43749 312 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF254O75437 659 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 APOC3P02656 99 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 CD3EP07766 207 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 AKAIN1P0CW23 69 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 MAKP20794 623 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 MPZP25189 248 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 PAX6P26367 422 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 NOS3P29474 1203 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ACVR1BP36896 505 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 RFC3P40938 356 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 MAP3K8P41279 467 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 GPR1P46091 355 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 RAB13P51153 203 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 PRKAG1P54619 331 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TAS2R20P59543 309 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 NAAAQ02083 359 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 TSTA3Q13630 321 aaPredicted RBP6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ODF1Q14990 250 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 PON3Q15166 354 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ZMYND11Q15326 602 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 OR1Q1Q15612 314 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 STK11Q15831 433 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 PAN3Q58A45 887 aaKnown RBP6.92□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF542PQ5EBM4 170 aa6.92□□□□□ -1.3
CCDC60-204ENST00000539847 VWA2Q5GFL6 755 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms