RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 IGLV1-50A0A075B6I6 118 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 ZNF816-ZNF321PA0A0X1KG74 233 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 DPM1O60762 260 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 EEDO75530 441 aaKnown RBP2.52□□□□□ -2.01
PCM1-219ENST00000523540 SLC25A14O95258 325 aaPredicted RBP2.52□□□□□ -2.01
PCM1-219ENST00000523540 CLIC3O95833 236 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 HLA-DPB1P04440 258 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 CRYGBP07316 175 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 ADRA2AP08913 450 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 CCNHP51946 323 aaPredicted RBP2.52□□□□□ -2.01
PCM1-219ENST00000523540 ACTR3P61158 418 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 ARG2P78540 354 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 MXD1Q05195 221 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
PCM1-219ENST00000523540 PON2Q15165 354 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 CCNJQ5T5M9 372 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 FBXW9Q5XUX1 488 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 ANKRD26P1Q6NSI1 321 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 ARL9Q6T311 187 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 CDR2LQ86X02 465 aaPredicted RBP2.52□□□□□ -2.01
PCM1-219ENST00000523540 NECAB1Q8N987 351 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 FBXL13Q8NEE6 735 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 SYNPRQ8TBG9 265 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 TM4SF18Q96CE8 201 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 PKNOX2Q96KN3 472 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 HMG20AQ9NP66 347 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 SLC2A8Q9NY64 477 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 LSM7Q9UK45 103 aaKnown RBP2.52□□□□□ -2.01
PCM1-219ENST00000523540 ST3GAL6Q9Y274 331 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 STARD10Q9Y365 291 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 RFNGQ9Y644 331 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 TMEM14AQ9Y6G1 99 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 PLA2R1Q13018 1463 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 ADAMTS13Q76LX8 1427 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 MAPK8IP3Q9UPT6 1336 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 CDC7O00311 574 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 ZNF207O43670 478 aaKnown RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 FOXH1O75593 365 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 CLPXO76031 633 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 TSPAN13O95857 204 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 NSG1P42857 185 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 SLC25A11Q02978 314 aaKnown RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 TWF1Q12792 350 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 SSX2Q16385 188 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 RABL6Q3YEC7 729 aaPredicted RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 VPS26BQ4G0F5 336 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 ZNF684Q5T5D7 378 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 RNASEKQ6P5S7 137 aaKnown RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 SASS6Q6UVJ0 657 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 TMEM107Q6UX40 140 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 LIX1Q8N485 282 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 RNF182Q8N6D2 247 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 SPATA4Q8NEY3 305 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 SHC3Q92529 594 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 ESR2Q92731 530 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 DUS3LQ96G46 650 aaKnown RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 ZNF578Q96N58 590 aaPredicted RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 SERPINB12Q96P63 405 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 ATP5SQ99766 215 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 RTBDNQ9BSG5 229 aaPredicted RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 SAV1Q9H4B6 383 aaPredicted RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 SYNDIG1Q9H7V2 258 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 FGF20Q9NP95 211 aaPredicted RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 KCNJ16Q9NPI9 418 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 PSMC3IPQ9P2W1 217 aaPredicted RBP2.51□□□□□ -2.01
PCM1-219ENST00000523540 GGA2Q9UJY4 613 aa2.51□□□□□ -2.01
PCM1-219ENST00000523540 SERPINE3A8MV23 424 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 H0Y8G0 127 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 RBFOX2O43251 390 aaKnown RBP eCLIP2.5□□□□□ -2.01
PCM1-219ENST00000523540 VAMP5O95183 116 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 CCNB1P14635 433 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 ZNF250P15622 560 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 PTMSP20962 102 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 NPY1RP25929 384 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 CHMLP26374 656 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 SULT1E1P49888 294 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 RGNQ15493 299 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 PTPN20Q4JDL3 420 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 FBXW12Q6X9E4 464 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 KCNG3Q8TAE7 436 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 SEH1LQ96EE3 360 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 RACGAP1Q9H0H5 632 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 UVRAGQ9P2Y5 699 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 GOLT1BQ9Y3E0 138 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 TNS2Q63HR2 1409 aa2.5□□□□□ -2.01
PCM1-219ENST00000523540 COL1A2P08123 1366 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 BRWD3Q6RI45 1802 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 TMEM223A0PJW6 202 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 CD5P06127 495 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 LINC00869P0C866 280 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 RAB3BP20337 219 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 GDI1P31150 447 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 THEM4Q5T1C6 240 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 ZNF880Q6PDB4 577 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 SHISA6Q6ZSJ9 500 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 HMGN2P46Q86SG4 172 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 ZNF461Q8TAF7 563 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 SLC2A14Q8TDB8 520 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 ZNF721Q8TF20 911 aa2.49□□□□□ -2.01
PCM1-219ENST00000523540 CCDC126Q96EE4 140 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms