RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ABHD3Q8WU67 409 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 NEURL3Q96EH8 262 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 SLC25A2Q9BXI2 301 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 PARP12Q9H0J9 701 aaKnown RBP3.3□□□□□ -1.88
PTPN12-213ENST00000519553 SAV1Q9H4B6 383 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-213ENST00000519553 COX16Q9P0S2 106 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 RFNGQ9Y644 331 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 TMEM14AQ9Y6G1 99 aa3.3□□□□□ -1.88
PTPN12-213ENST00000519553 GPATCH8Q9UKJ3 1502 aaKnown RBP3.29□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF816-ZNF321PA0A0X1KG74 233 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 DPM1O60762 260 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 SLC25A14O95258 325 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-213ENST00000519553 TSPAN13O95857 204 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 CD5P06127 495 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 NPY1RP25929 384 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 CEACAM6P40199 344 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 CCNHP51946 323 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-213ENST00000519553 ECH1Q13011 328 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF684Q5T5D7 378 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 CCDC73Q6ZRK6 1079 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 OR9K2Q8NGE7 335 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF461Q8TAF7 563 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 FBXO32Q969P5 355 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 SYNDIG1Q9H7V2 258 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 HMG20AQ9NP66 347 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 NUP50Q9UKX7 468 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 ST3GAL6Q9Y274 331 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 STARD10Q9Y365 291 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 WIF1Q9Y5W5 379 aa3.29□□□□□ -1.88
PTPN12-213ENST00000519553 COL1A2P08123 1366 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 IGLV1-50A0A075B6I6 118 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 TMEM223A0PJW6 202 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 SERPINE3A8MV23 424 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 CDC7O00311 574 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 RBFOX2O43251 390 aaKnown RBP eCLIP3.28□□□□□ -1.88
PTPN12-213ENST00000519553 CRYGBP07316 175 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 NSG1P42857 185 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 ARG2P78540 354 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 SLC25A11Q02978 314 aaKnown RBP3.28□□□□□ -1.88
PTPN12-213ENST00000519553 TCP10Q12799 353 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 RABL6Q3YEC7 729 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-213ENST00000519553 ZNF880Q6PDB4 577 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 ARL9Q6T311 187 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 FBXW12Q6X9E4 464 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 HMGN2P46Q86SG4 172 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 CDR2LQ86X02 465 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-213ENST00000519553 NECAB1Q8N987 351 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 FBXL13Q8NEE6 735 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 GPR151Q8TDV0 419 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 SHC3Q92529 594 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 DUS3LQ96G46 650 aaKnown RBP3.28□□□□□ -1.88
PTPN12-213ENST00000519553 PKNOX2Q96KN3 472 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 SERPINB12Q96P63 405 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 ING2Q9H160 280 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 FGF20Q9NP95 211 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-213ENST00000519553 KCNJ16Q9NPI9 418 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 PSMC3IPQ9P2W1 217 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-213ENST00000519553 UVRAGQ9P2Y5 699 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 GGA2Q9UJY4 613 aa3.28□□□□□ -1.88
PTPN12-213ENST00000519553 NUP214P35658 2090 aaPredicted RBP3.28□□□□□ -1.89
PTPN12-213ENST00000519553 VAMP5O95183 116 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 CLIC3O95833 236 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 NDUFB10O96000 172 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 LINC00869P0C866 280 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 RGNQ15493 299 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 PTPN20Q4JDL3 420 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 XKR4Q5GH76 650 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 CCNJQ5T5M9 372 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 RNASEKQ6P5S7 137 aaKnown RBP3.27□□□□□ -1.89
PTPN12-213ENST00000519553 SASS6Q6UVJ0 657 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 TMEM107Q6UX40 140 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 SHISA6Q6ZSJ9 500 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 LYPD1Q8N2G4 141 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 SPATA4Q8NEY3 305 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 ZNF2Q9BSG1 426 aaPredicted RBP3.27□□□□□ -1.89
PTPN12-213ENST00000519553 PLA2R1Q13018 1463 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 ADAMTS13Q76LX8 1427 aa3.27□□□□□ -1.89
PTPN12-213ENST00000519553 RAD51BO15315 384 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 GCM2O75603 506 aaPredicted RBP3.26□□□□□ -1.89
PTPN12-213ENST00000519553 GDI1P31150 447 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 ACTR3P61158 418 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 TWF1Q12792 350 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 VPS26BQ4G0F5 336 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 KRTAP13-2Q52LG2 175 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 PLET1Q6UQ28 207 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 TMEM205Q6UW68 189 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 LIX1Q8N485 282 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 KCNG3Q8TAE7 436 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 C15orf40Q8WUR7 153 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 RGP1Q92546 391 aaPredicted RBP3.26□□□□□ -1.89
PTPN12-213ENST00000519553 RBMXL1Q96E39 390 aaKnown RBP3.26□□□□□ -1.89
PTPN12-213ENST00000519553 LINC00477Q96M19 166 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 ATP5SQ99766 215 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 SLC2A8Q9NY64 477 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 TMED5Q9Y3A6 229 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 TNS2Q63HR2 1409 aa3.26□□□□□ -1.89
PTPN12-213ENST00000519553 IGLV2-18A0A075B6J9 118 aa3.25□□□□□ -1.89
PTPN12-213ENST00000519553 GLYATL1P3A0A0U1RQE8 302 aa3.25□□□□□ -1.89
PTPN12-213ENST00000519553 C7orf66A4D0T2 115 aa3.25□□□□□ -1.89
PTPN12-213ENST00000519553 MPZL1O95297 269 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms