RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 IGLV1-50A0A075B6I6 118 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 TRBV11-1A0A0K0K1C0 115 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 GLYATL1P3A0A0U1RQE8 302 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 ZNF816-ZNF321PA0A0X1KG74 233 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 A0A1B0GVX0 72 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 C9JVG2 144 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 AP3B1O00203 1094 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 AIM2O14862 343 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 RAB29O14966 203 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 CLOCKO15516 846 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 ENTPD5O75356 428 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 CLPXO76031 633 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 CTDNEP1O95476 244 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 HLA-DPB1P04440 258 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 F2RP25116 425 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 OTX1P32242 354 aaPredicted RBP2.67□□□□□ -1.98
SQLE-202ENST00000518604 CSNK1A1P48729 337 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 CDH6P55285 790 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 C5orf47Q569G3 176 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 CCDC183Q5T5S1 534 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 SLC8B1Q6J4K2 584 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 BIVMQ86UB2 503 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 OR10J6PQ8NGY7 276 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 OR5W2Q8NH69 310 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 ELMO1Q92556 727 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 SLC25A2Q9BXI2 301 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 HMG20AQ9NP66 347 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 NMRK1Q9NWW6 199 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 TMED5Q9Y3A6 229 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 RRP15Q9Y3B9 282 aaKnown RBP2.67□□□□□ -1.98
SQLE-202ENST00000518604 KCNE3Q9Y6H6 103 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 ARID1AO14497 2285 aa2.67□□□□□ -1.98
SQLE-202ENST00000518604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.66□□□□□ -1.98
SQLE-202ENST00000518604 IGHV5-10-1A0A0J9YXX1 117 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 A0A1W2PP18 115 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 LRCOL1A6NCL2 159 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 SPECC1L-ADORA2AF8WAN1 911 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 B4GALT5O43286 388 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 GABARAPO95166 117 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 IGHV1-8P0DP01 117 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 ZNF250P15622 560 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 WARSP23381 471 aaKnown RBP2.66□□□□□ -1.98
SQLE-202ENST00000518604 RRM2P31350 389 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 CEACAM6P40199 344 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 LINC00483Q53H64 154 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 C9orf135Q5VTT2 229 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 SPECC1LQ69YQ0 1117 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 NANOGP8Q6NSW7 305 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 MMAAQ8IVH4 418 aaKnown RBP2.66□□□□□ -1.98
SQLE-202ENST00000518604 GTPBP8Q8N3Z3 284 aaPredicted RBP2.66□□□□□ -1.98
SQLE-202ENST00000518604 OR2A1Q8NGT9 310 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 ZNF502Q8TBZ5 544 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 SLC7A13Q8TCU3 470 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 ABHD3Q8WU67 409 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 KIFAP3Q92845 792 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 SLC38A4Q969I6 547 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 DNAJC1Q96KC8 554 aaKnown RBP2.66□□□□□ -1.98
SQLE-202ENST00000518604 ZNF681Q96N22 645 aa2.66□□□□□ -1.98
SQLE-202ENST00000518604 ZNFX1Q9P2E3 1918 aaKnown RBP2.66□□□□□ -1.98
SQLE-202ENST00000518604 SLIT3O75094 1523 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 SIRPB1O00241 398 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 NDUFAB1O14561 156 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 RNF13O43567 381 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 KLHL41O60662 606 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 DPM1O60762 260 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 TSPAN13O95857 204 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 AGTP01019 485 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 BCHEP06276 602 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 GPX4P36969 197 aaPredicted RBP2.65□□□□□ -1.99
SQLE-202ENST00000518604 SLC1A1P43005 524 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 PRMT2P55345 433 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 RAP1AP62834 184 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 SLC25A11Q02978 314 aaKnown RBP2.65□□□□□ -1.99
SQLE-202ENST00000518604 MXD1Q05195 221 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 MAB21L1Q13394 359 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 ZSCAN26Q16670 478 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 CARD17Q5XLA6 110 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 ARL9Q6T311 187 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 METAP1DQ6UB28 335 aaPredicted RBP2.65□□□□□ -1.99
SQLE-202ENST00000518604 BHLHA15Q7RTS1 189 aaPredicted RBP2.65□□□□□ -1.99
SQLE-202ENST00000518604 UBALD2Q8IYN6 164 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 PRSS58Q8IYP2 241 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 IQCKQ8N0W5 287 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 RNF139Q8WU17 664 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 TM4SF18Q96CE8 201 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 GALNT14Q96FL9 552 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 SLC29A1Q99808 456 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 SPIN2AQ99865 258 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 SPIN2BQ9BPZ2 258 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 OR51M1Q9H341 326 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 SYNDIG1Q9H7V2 258 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 UBE2ZQ9H832 354 aaPredicted RBP2.65□□□□□ -1.99
SQLE-202ENST00000518604 KCNJ16Q9NPI9 418 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 GPATCH2LQ9NWQ4 482 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 ZNRD1Q9P1U0 126 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 UVRAGQ9P2Y5 699 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 LGALS13Q9UHV8 139 aa2.65□□□□□ -1.99
SQLE-202ENST00000518604 YTHDF2Q9Y5A9 579 aaKnown RBP2.65□□□□□ -1.99
SQLE-202ENST00000518604 LYRM9A8MSI8 78 aa2.64□□□□□ -1.99
SQLE-202ENST00000518604 RP2O75695 350 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms