RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ATP8B1O43520 1251 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 CLPTM1O96005 669 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF32P17041 273 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 PCMT1P22061 227 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 COL8A2P25067 703 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 PSME3P61289 254 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 ERVK-25P63136 954 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 TEKQ02763 1124 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 CCNIQ14094 377 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 TRIP10Q15642 601 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 CR1LQ2VPA4 569 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF718Q3SXZ3 478 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 FAM27BQ5VT28 67 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 ARL9Q6T311 187 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 IL17RELQ6ZVW7 336 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 MEX3DQ86XN8 651 aaKnown RBP11.71□□□□□ -0.53
TCOF1-215ENST00000515516 C1orf174Q8IYL3 243 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 CPEB3Q8NE35 698 aaKnown RBP11.71□□□□□ -0.53
TCOF1-215ENST00000515516 OR13C2Q8NGS9 318 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 NABP1Q96AH0 204 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 NMD3Q96D46 503 aaKnown RBP11.71□□□□□ -0.53
TCOF1-215ENST00000515516 NSRP1Q9H0G5 558 aaKnown RBP11.71□□□□□ -0.53
TCOF1-215ENST00000515516 ANKRD19PQ9H560 264 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 KRCC1Q9NPI7 259 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-215ENST00000515516 MAN2C1Q9NTJ4 1040 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 DECR2Q9NUI1 292 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 ADA2Q9NZK5 511 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 SONP18583 2426 aaKnown RBP11.71□□□□□ -0.54
TCOF1-215ENST00000515516 IGLV3-9A0A075B6K5 115 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 A0A087WUU8 490 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 IGKV1D-43A0A0B4J1Z2 117 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 C12orf71A8MTZ7 269 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 FFAR1O14842 300 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 CST2P09228 141 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 NCK1P16333 377 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 LAP3P28838 519 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 THBS2P35442 1172 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 SRP14P37108 136 aaKnown RBP11.7□□□□□ -0.54
TCOF1-215ENST00000515516 GPR4P46093 362 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 ARHGDIAP52565 204 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 ERVS71-1P61550 626 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 PSG4Q00888 419 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 KRT72Q14CN4 511 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 ZBED5Q49AG3 693 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 C8orf82Q6P1X6 216 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-215ENST00000515516 TBPL2Q6SJ96 375 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 TMPRSS11FQ6ZWK6 438 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 TREML1Q86YW5 311 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 LRRC75AQ8NAA5 344 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 AKR7LQ8NHP1 331 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 TSPAN32Q96QS1 320 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 FAM107BQ9H098 131 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 NMNAT1Q9HAN9 279 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-215ENST00000515516 SPAG4Q9NPE6 437 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 TMEFF2Q9UIK5 374 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-215ENST00000515516 SAMD4AQ9UPU9 718 aaKnown RBP11.7□□□□□ -0.54
TCOF1-215ENST00000515516 ENPP4Q9Y6X5 453 aa11.7□□□□□ -0.54
TCOF1-215ENST00000515516 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
TCOF1-215ENST00000515516 PLSCR5A0PG75 271 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 B4DSR2 109 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 AHCYL1O43865 530 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 H1F0P07305 194 aaKnown RBP11.69□□□□□ -0.54
TCOF1-215ENST00000515516 CD14P08571 375 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 MSR1P21757 451 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 PRDX6P30041 224 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 IL2RGP31785 369 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 MAGEB1P43366 347 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 CDH15P55291 814 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 CCL8P80075 99 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 GLO1Q04760 184 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 FGD3Q5JSP0 725 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 GLYATQ6IB77 296 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 CPLX4Q7Z7G2 160 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 SYT9Q86SS6 491 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 CLDN22Q8N7P3 220 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 POM121L2Q96KW2 1035 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 SOX7Q9BT81 388 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 WACQ9BTA9 647 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 OR2H1Q9GZK4 316 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 NARFLQ9H6Q4 476 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 ELOVL3Q9HB03 270 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 ZNF275Q9NSD4 429 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-215ENST00000515516 NKIRAS2Q9NYR9 191 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 EGFL7Q9UHF1 273 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 AURKCQ9UQB9 309 aa11.69□□□□□ -0.54
TCOF1-215ENST00000515516 ARFGEF3Q5TH69 2177 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 CDC14BO60729 498 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 IGHV3-13P01766 116 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 TFP02787 698 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 ITGA2P17301 1181 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 RHCEP18577 417 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 FUT4P22083 530 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 ZNF81P51508 661 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 DVL1P1P54792 670 aaPredicted RBP11.68□□□□□ -0.54
TCOF1-215ENST00000515516 TSTQ16762 297 aaKnown RBP11.68□□□□□ -0.54
TCOF1-215ENST00000515516 SPATA46Q5T0L3 261 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 GLCCI1Q86VQ1 547 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 FAM156AQ8NDB6 213 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 CLDND2Q8NHS1 167 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 ABHD4Q8TB40 342 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms