RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CCNB1IP1Q9NPC3 277 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 POLE4Q9NR33 117 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 RASSF1Q9NS23 344 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 CRIM1Q9NZV1 1036 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 CGGBP1Q9UFW8 167 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 TMEFF2Q9UIK5 374 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 ADAM18Q9Y3Q7 739 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 UGT2A1Q9Y4X1 527 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 PCDHGB1Q9Y5G3 927 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 TMEM14AQ9Y6G1 99 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 DSCAMO60469 2012 aa7.4□□□□□ -1.23
PDGFC-205ENST00000506880 NOTCH2Q04721 2471 aa7.4□□□□□ -1.23
PDGFC-205ENST00000506880 ITPR2Q14571 2701 aa7.4□□□□□ -1.23
PDGFC-205ENST00000506880 CELSR2Q9HCU4 2923 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 RAI1Q7Z5J4 1906 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 IGLV1-36A0A0B4J1U3 117 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 IRGMA1A4Y4 181 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SOCS2O14508 198 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SLC16A7O60669 478 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SERPINI2O75830 405 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 GLCEO94923 617 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 RNF224P0DH78 156 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 FUT4P22083 530 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 CDKN2AP42771 156 aaKnown RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 IST1P53990 364 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SNRPGP62308 76 aaKnown RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 CSNK2BP67870 215 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SLC34A1Q06495 639 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 TOP3AQ13472 1001 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 GGTLC2Q14390 218 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 MELKQ14680 651 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 GINS1Q14691 196 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 RCN1Q15293 331 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 MOGQ16653 247 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF362Q5T0B9 420 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 OGFRL1Q5TC84 451 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 C12orf73Q69YU5 71 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 LEG1Q6P5S2 330 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 PLXDC2Q6UX71 529 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 LINGO2Q7L985 606 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 ICA1LQ8NDH6 482 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SETD9Q8NE22 299 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SLC26A10Q8NG04 563 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 OR10H5Q8NGA6 315 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 OR52E2Q8NGJ4 325 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 NABP1Q96AH0 204 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF775Q96BV0 537 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 MRPL48Q96GC5 212 aaKnown RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 PITX2Q99697 317 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 COQ7Q99807 217 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 CIB1Q99828 191 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 APOL4Q9BPW4 351 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 BCL2L14Q9BZR8 327 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 NUAK2Q9H093 628 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SYT4Q9H2B2 425 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 TOR3AQ9H497 397 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 OPA3Q9H6K4 179 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 EGLN3Q9H6Z9 239 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 ELOVL3Q9HB03 270 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 SMPD3Q9NY59 655 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 WARS2Q9UGM6 360 aaKnown RBP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF391Q9UJN7 358 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.39□□□□□ -1.23
PDGFC-205ENST00000506880 B9D1Q9UPM9 204 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 RNF115Q9Y4L5 304 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 APCP25054 2843 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 ARID1AO14497 2285 aa7.39□□□□□ -1.23
PDGFC-205ENST00000506880 DCHS2Q6V1P9 2916 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 AKAP6Q13023 2319 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 OR6C6A6NF89 314 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 ACOD1A6NK06 481 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 DEFB108AA8MXU0 73 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 EI24O14681 340 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 THBDP07204 575 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 MMP7P09237 267 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-205ENST00000506880 GAAP10253 952 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 PAX1P15863 534 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 CTLA4P16410 223 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF823P16415 610 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF14P17017 642 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-205ENST00000506880 CD40P25942 277 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 DCTDP32321 178 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 LIPAP38571 399 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 RAD52P43351 418 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 SLC15A1P46059 708 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 CAPZA2P47755 286 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 RAB1AP62820 205 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 HIST1H3AP68431 136 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 RUNX1T1Q06455 604 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 SNAPC1Q16533 368 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 TBC1D28Q2M2D7 210 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 HIST2H3PS2Q5TEC6 136 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 CARD17Q5XLA6 110 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 LPCAT4Q643R3 524 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 PTCHD4Q6ZW05 846 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 HIST2H3AQ71DI3 136 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 OR6V1Q8N148 313 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 CBR4Q8N4T8 237 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF611Q8N823 705 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 SYT14Q8NB59 555 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms