RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 RPL36Q9Y3U8 105 aaKnown RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 PCDHGB1Q9Y5G3 927 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 SHANK1Q9Y566 2161 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 A0A1W2PPL8 197 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 C12orf71A8MTZ7 269 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 C16orf97H3BN30 126 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 ENTPD6O75354 484 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 CLIC3O95833 236 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 ITGA5P08648 1049 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 ZNF823P16415 610 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 SLC2A5P22732 501 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 IGHV1-2P23083 117 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 IL32P24001 234 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 EDNRAP25101 427 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 CXCR4P61073 352 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 CDK5R2Q13319 367 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 SGCAQ16586 387 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 KLHL22Q53GT1 634 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 FAM27BQ5VT28 67 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 KLHL24Q6TFL4 600 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 ZNF813Q6ZN06 617 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 LINGO2Q7L985 606 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 SHFQ7M4L6 423 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 BHLHA15Q7RTS1 189 aaPredicted RBP10.92□□□□□ -0.66
SNX17-208ENST00000493711 SYT9Q86SS6 491 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 CXorf67Q86X51 503 aaPredicted RBP10.92□□□□□ -0.66
SNX17-208ENST00000493711 SLC26A10Q8NG04 563 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 OR1K1Q8NGR3 316 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 OR6K6Q8NGW6 343 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 ITLN2Q8WWU7 325 aaPredicted RBP10.92□□□□□ -0.66
SNX17-208ENST00000493711 RNASE6Q93091 150 aaKnown RBP10.92□□□□□ -0.66
SNX17-208ENST00000493711 TSSK2Q96PF2 358 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 MNTQ99583 582 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 MED20Q9H944 212 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 MARCH7Q9H992 704 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 POLE4Q9NR33 117 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 FBXL3Q9UKT7 428 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 UGT2A1Q9Y4X1 527 aa10.92□□□□□ -0.66
SNX17-208ENST00000493711 RP1L1Q8IWN7 2480 aaPredicted RBP10.91□□□□□ -0.66
SNX17-208ENST00000493711 WIPF3A6NGB9 483 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 M0R129 80 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 DCTN6O00399 190 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 ZG16O60844 167 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 AGFG2O95081 481 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 WNT11O96014 354 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 CST2P09228 141 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
SNX17-208ENST00000493711 PYCR1P32322 319 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 ATP6V1E1P36543 226 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 MTNR1AP48039 350 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 SORDQ00796 357 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 GGTLC2Q14390 218 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 SLC36A2Q495M3 483 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 TEX30Q5JUR7 227 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 LINC01590Q5TEZ4 76 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 STAC2Q6ZMT1 411 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 SLC22A24Q8N4F4 322 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 BBS1Q8NFJ9 593 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 BCL2L2Q92843 193 aaPredicted RBP10.91□□□□□ -0.66
SNX17-208ENST00000493711 UBE2FQ969M7 185 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 CNBD2Q96M20 576 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 INTS14Q96SY0 518 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 CNN2Q99439 309 aaKnown RBP10.91□□□□□ -0.66
SNX17-208ENST00000493711 CDADC1Q9BWV3 514 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 HCAR1Q9BXC0 346 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 YTHDF1Q9BYJ9 559 aaKnown RBP10.91□□□□□ -0.66
SNX17-208ENST00000493711 PLCXD1Q9NUJ7 323 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 SCN3BQ9NY72 215 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 DNAJC27Q9NZQ0 273 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 BLOC1S6Q9UL45 172 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 AMDHD2Q9Y303 409 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 TMEM14AQ9Y6G1 99 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 FREM3P0C091 2139 aa10.91□□□□□ -0.66
SNX17-208ENST00000493711 ARPC4-TTLL3A0A0A6YYG9 625 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 IGKV1D-43A0A0B4J1Z2 117 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 EFCAB10A6NFE3 127 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 FAM90A27PA6NNH2 459 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 WBP4O75554 376 aaKnown RBP10.9□□□□□ -0.66
SNX17-208ENST00000493711 LYZL6O75951 148 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 UBL3O95164 117 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 FADS2O95864 444 aaKnown RBP10.9□□□□□ -0.66
SNX17-208ENST00000493711 GYPBP06028 91 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 GAAP10253 952 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 CLUP10909 449 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 B4GALT1P15291 398 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 UGT2B10P36537 528 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 ARR3P36575 388 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 ENTPD1P49961 510 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 UBE2NP61088 152 aaKnown RBP10.9□□□□□ -0.66
SNX17-208ENST00000493711 RAB40BQ12829 278 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 ETFDHQ16134 617 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 GABRA6Q16445 453 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 TIMM23BQ5SRD1 257 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 C6orf141Q5SZD1 244 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 TMEM53Q6P2H8 277 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 SLC16A14Q7RTX9 510 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 SLC16A9Q7RTY1 509 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 OR2AJ1Q8NGZ0 328 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 HSD17B8Q92506 261 aa10.9□□□□□ -0.66
SNX17-208ENST00000493711 NABP1Q96AH0 204 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms