RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 MYCBPQ99417 103 aaPredicted RBP18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 POLE4Q9NR33 117 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 LAMP5Q9UJQ1 280 aa18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 CAB39Q9Y376 341 aaPredicted RBP18.05■□□□□ 0.48
VCPKMT-203ENST00000484763 NBEAQ8NFP9 2946 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 ZGRF1Q86YA3 2104 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 PHYHO14832 338 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 PSKH1P11801 424 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 PSMB9P28065 219 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 OR3A2P47893 321 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 PER3P56645 1201 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 ACTA2P62736 377 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 ACTG2P63267 376 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 ROR2Q01974 943 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 STK11Q15831 433 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 KCNMB1Q16558 191 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 PCK2Q16822 640 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 EIF2S3LQ2VIR3 472 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 CEACAM16Q2WEN9 425 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 TEX30Q5JUR7 227 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 OR2G6Q5TZ20 316 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 TMPRSS11AQ6ZMR5 421 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 SSX6Q7RTT6 188 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF837Q96EG3 531 aaPredicted RBP18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 MRPL48Q96GC5 212 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 NELFAQ9H3P2 528 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 BATF3Q9NR55 127 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 UPB1Q9UBR1 384 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 KCNG2Q9UJ96 466 aa18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 PHF3Q92576 2039 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF587BE7ETH6 402 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 SCG5P05408 212 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 TIMP3P35625 211 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 SIRPAP78324 504 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 RAB39AQ14964 217 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 SPHARQ15513 63 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 SYT6Q5T7P8 510 aaPredicted RBP18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 SATL1Q86VE3 508 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 DOLPP1Q86YN1 238 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 UBE2J2Q8N2K1 259 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 CNEP1R1Q8N9A8 125 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF454Q8N9F8 522 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 OR6K3Q8NGY3 331 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 ZFP3Q96NJ6 502 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 FREM1Q5H8C1 2179 aa18.03■□□□□ 0.48
VCPKMT-203ENST00000484763 RPL36A-HNRNPH2H7BZ11 118 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 TMCC2O75069 709 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 CRHP06850 196 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 ALOX5APP20292 161 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 MSR1P21757 451 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 CD79BP40259 229 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 GP2P55259 537 aaKnown RBP18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 MRPS34P82930 218 aaKnown RBP18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 SLC18B1Q6NT16 456 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 ZNF322Q6U7Q0 402 aaPredicted RBP18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 ABHD12BQ7Z5M8 362 aaPredicted RBP18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 GPR141Q7Z602 305 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 SNX33Q8WV41 574 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 NABP1Q96AH0 204 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 CDADC1Q9BWV3 514 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 TTTY10Q9BZA0 68 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 EMC7Q9NPA0 242 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 MALT1Q9UDY8 824 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 POLR1DQ9Y2S0 133 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 KLHDC2Q9Y2U9 406 aa18.02■□□□□ 0.48
VCPKMT-203ENST00000484763 IL2RAP01589 272 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 NPR2P20594 1047 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 KIR2DL2P43627 348 aaPredicted RBP18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 SGCAQ16586 387 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 TIGD6Q17RP2 521 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 CDONQ4KMG0 1287 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 C3P1Q6ZMU1 363 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 RPRMLQ8N4K4 120 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 ST6GALNAC3Q8NDV1 305 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 TMIGD2Q96BF3 282 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 COG8Q96MW5 612 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 FOXB1Q99853 325 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 TMEM38BQ9NVV0 291 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 PRSS50Q9UI38 385 aa18.02■□□□□ 0.47
VCPKMT-203ENST00000484763 TOXO94900 526 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 LSM6P62312 80 aaKnown RBP18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 NFATC3Q12968 1075 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 EIF2B1Q14232 305 aaKnown RBP18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 FBXW9Q5XUX1 488 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 TFAP2EQ6VUC0 442 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 SYS1Q8N2H4 156 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 ZNF485Q8NCK3 441 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 OR13F1Q8NGS4 319 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 THEM6Q8WUY1 208 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 SPRYD4Q8WW59 207 aaPredicted RBP18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 GATAD2BQ8WXI9 593 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 ASB17Q8WXJ9 295 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 HTRA1Q92743 480 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 MGLLQ99685 303 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 TTYH2Q9BSA4 534 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 CYB5R1Q9UHQ9 305 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 TINAGQ9UJW2 476 aa18.01■□□□□ 0.47
VCPKMT-203ENST00000484763 DPPA5A6NC42 116 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 SEC14L2O76054 403 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 MT-ND5P03915 603 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms