RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 WNK2Q9Y3S1 2297 aa13.01□□□□□ -0.33
LIMS3-203ENST00000480744 TANC2Q9HCD6 1990 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 IGHV1-69-2A0A0G2JMI3 117 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 A0A1W2PPL8 197 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 GMNCA6NCL1 334 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 MGRN1O60291 552 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 SNX3O60493 162 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 TSPAN19P0C672 248 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 GCH1P30793 250 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 CTXN1P60606 82 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 RPL27P61353 136 aaKnown RBP13□□□□□ -0.33
LIMS3-203ENST00000480744 LMO4P61968 165 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 TEKQ02763 1124 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 FAHD2BQ6P2I3 314 aaPredicted RBP13□□□□□ -0.33
LIMS3-203ENST00000480744 SLC25A47Q6Q0C1 308 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 ZNF101Q8IZC7 436 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 CLDN22Q8N7P3 220 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 LZICQ8WZA0 190 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 NMD3Q96D46 503 aaKnown RBP13□□□□□ -0.33
LIMS3-203ENST00000480744 FAHD2AQ96GK7 314 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 RBP7Q96R05 134 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 ALG12Q9BV10 488 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 SAP30LQ9HAJ7 183 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 A4GNTQ9UNA3 340 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 HIF3AQ9Y2N7 669 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 CAPN7Q9Y6W3 813 aa13□□□□□ -0.33
LIMS3-203ENST00000480744 TRAV27A0A087WT01 109 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 ELOVL7A1L3X0 281 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 NPIPB13A6NJU9 1138 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 NPIPB4C9JG80 1138 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 SPRY3O43610 288 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 IGHV3-13P01766 116 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 MAKP20794 623 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 LAP3P28838 519 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 MPV17P39210 176 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 WNT5AP41221 380 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 GUCA1AP43080 201 aaPredicted RBP12.99□□□□□ -0.33
LIMS3-203ENST00000480744 CRYBB2P43320 205 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 ZNF81P51508 661 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 SELENOWP63302 87 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 PSG4Q00888 419 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 TAF11Q15544 211 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 ZNF718Q3SXZ3 478 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 THEM4Q5T1C6 240 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 ZNF771Q7L3S4 317 aaPredicted RBP12.99□□□□□ -0.33
LIMS3-203ENST00000480744 VTCN1Q7Z7D3 282 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 TREML1Q86YW5 311 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 NRMQ8IXM6 262 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 POU5F2Q8N7G0 328 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 OR51A7Q8NH64 312 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 IPCEF1Q8WWN9 437 aaPredicted RBP12.99□□□□□ -0.33
LIMS3-203ENST00000480744 RCN3Q96D15 328 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 POM121L2Q96KW2 1035 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 FNDC11Q9BVV2 318 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 ZNF665Q9H7R5 613 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 NKIRAS2Q9NYR9 191 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 GMPR2Q9P2T1 348 aaKnown RBP12.99□□□□□ -0.33
LIMS3-203ENST00000480744 CACNG2Q9Y698 323 aa12.99□□□□□ -0.33
LIMS3-203ENST00000480744 ANK2Q01484 3957 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 LOC100509620A0A075B734 347 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 TRAV20A0A0B4J274 112 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 PLSCR5A0PG75 271 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 CLDN25C9JDP6 229 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 J3KTA2 159 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 RGS9O75916 674 aaPredicted RBP12.98□□□□□ -0.33
LIMS3-203ENST00000480744 ZNF682O95780 498 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 IFNW1P05000 195 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 FUT4P22083 530 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 HFEQ30201 348 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 FAM27BQ5VT28 67 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 UNQ6126/PRO20091Q6UXV3 157 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 RFPL4BQ6ZWI9 263 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 ALDH16A1Q8IZ83 802 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.98□□□□□ -0.33
LIMS3-203ENST00000480744 ABHD4Q8TB40 342 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 SLC25A40Q8TBP6 338 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 RAB39BQ96DA2 213 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 TIMD4Q96H15 378 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 OR2H1Q9GZK4 316 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 OR2J1Q9GZK6 312 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 WNT5BQ9H1J7 359 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 MYLK2Q9H1R3 596 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 CMTM6Q9NX76 183 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 WIPI2Q9Y4P8 454 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 SNX13Q9Y5W8 968 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 ARHGAP32A7KAX9 2087 aa12.98□□□□□ -0.33
LIMS3-203ENST00000480744 DYSFO75923 2080 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 HTR3EA5X5Y0 456 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 A6NIZ1 184 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 EFCAB9A8MZ26 197 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 H7C1C5 153 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 GSTA4O15217 222 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 MPZL1O95297 269 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 PNPP00491 289 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 IGHV1-46P01743 117 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 IGHMP01871 453 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 CST2P09228 141 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 ANPEPP15144 967 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 RAP1BP61224 184 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 PCBD1P61457 104 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms