RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 EMC6Q9BV81 110 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 SRXN1Q9BYN0 137 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 COMMD4Q9H0A8 199 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 SLCO1C1Q9NYB5 712 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 GLTPQ9NZD2 209 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 PLEKHB1Q9UF11 243 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-204ENST00000480057 KIAA1549Q9HCM3 1950 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 IGKV1D-43A0A0B4J1Z2 117 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 TRBV5-5A0A0J9YX44 114 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 OR4C45A6NMZ5 311 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF716A6NP11 495 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 LOC110117498-PIK3R3F6TDL0 507 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 MAGEB4O15481 346 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-204ENST00000480057 CYTIPO60759 359 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 GPANK1O95872 356 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 F10P00742 488 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 RAF1P04049 648 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF708P17019 499 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 PSMB10P40306 273 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 LHX2P50458 406 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 TNFSF10P50591 281 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 CLDN20P56880 219 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 NANOS3P60323 173 aaKnown RBP9.79□□□□□ -0.84
VTI1A-204ENST00000480057 RPS11P62280 158 aaKnown RBP eCLIP9.79□□□□□ -0.84
VTI1A-204ENST00000480057 LSM6P62312 80 aaKnown RBP9.79□□□□□ -0.84
VTI1A-204ENST00000480057 PPIAP62937 165 aaKnown RBP9.79□□□□□ -0.84
VTI1A-204ENST00000480057 HNRNPA0Q13151 305 aaKnown RBP9.79□□□□□ -0.84
VTI1A-204ENST00000480057 CAMK2DQ13557 499 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF766Q5HY98 468 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 MZT2AQ6P582 158 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 WDFY1Q8IWB7 410 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 OR2G2Q8NGZ5 317 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 OR5AK2Q8NH90 309 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 ST7LQ8TDW4 575 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 RNF133Q8WVZ7 376 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 C11orf40Q8WZ69 217 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 TMEM45BQ96B21 275 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 MAP6Q96JE9 813 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 CEP19Q96LK0 163 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 C4orf45Q96LM5 186 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 TTTY10Q9BZA0 68 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.79□□□□□ -0.84
VTI1A-204ENST00000480057 NIPAL2Q9H841 368 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 RNF122Q9H9V4 155 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 ELOVL3Q9HB03 270 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 CYB5R1Q9UHQ9 305 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 CMAHPQ9Y471 501 aa9.79□□□□□ -0.84
VTI1A-204ENST00000480057 NCKAP5O14513 1909 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 IGKV3D-15A0A087WSY6 115 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 TRABD2BA6NFA1 517 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 GPR171O14626 319 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 CXCL13O43927 109 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 ZFPL1O95159 310 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 QDPRP09417 244 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 CLEC2LP0C7M8 214 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 PRKAR1AP10644 381 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 PSKH1P11801 424 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 WT1P19544 449 aaPredicted RBP9.78□□□□□ -0.84
VTI1A-204ENST00000480057 CALRP27797 417 aaKnown RBP9.78□□□□□ -0.84
VTI1A-204ENST00000480057 CLDN15P56746 228 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 CLDN18P56856 261 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 PPP3R1P63098 170 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 NHLH1Q02575 133 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 MXD1Q05195 221 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 STK11Q15831 433 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 SPANXN2Q5MJ10 180 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 DDI2Q5TDH0 399 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 C16orf87Q6PH81 154 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 C20orf196Q8IYI0 205 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 ZIC4Q8N9L1 334 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 OR6N1Q8NGY5 312 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 UCN2Q96RP3 112 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 AMELYQ99218 206 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 KCNS3Q9BQ31 491 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 HES7Q9BYE0 225 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 C1orf198Q9H425 327 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 SLC24A3Q9HC58 644 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 POLE4Q9NR33 117 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 FRRS1LQ9P0K9 344 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 FOXD3Q9UJU5 478 aaPredicted RBP9.78□□□□□ -0.84
VTI1A-204ENST00000480057 FLVCR1Q9Y5Y0 555 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 R4GMQ9 66 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 SPEGQ15772 3267 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 MUC6Q6W4X9 2439 aa9.78□□□□□ -0.84
VTI1A-204ENST00000480057 A0A0C4DFX4 3053 aa9.77□□□□□ -0.84
VTI1A-204ENST00000480057 TRAV17A0A0B4J275 112 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 A0A1W2PPL8 197 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 SHISA3A0PJX4 238 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 A6NL46 340 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 PDCD5O14737 125 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 DHHO43323 396 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 SLC43A1O75387 559 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 SRSF10O75494 262 aaKnown RBP9.77□□□□□ -0.85
VTI1A-204ENST00000480057 MPZL1O95297 269 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 ZNF12P17014 697 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 KLK2P20151 261 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 MSR1P21757 451 aa9.77□□□□□ -0.85
VTI1A-204ENST00000480057 PTBP1P26599 531 aaKnown RBP eCLIP9.77□□□□□ -0.85
VTI1A-204ENST00000480057 GUCA1AP43080 201 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-204ENST00000480057 MAGEA5P43359 124 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms