RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PFDN6O15212 129 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 PRAF2O60831 178 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 SS18L1O75177 396 aaPredicted RBP3.62□□□□□ -1.83
VPS50-214ENST00000477935 SAP30O75446 220 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 SRSF10O75494 262 aaKnown RBP3.62□□□□□ -1.83
VPS50-214ENST00000477935 ZNF189O75820 626 aaPredicted RBP3.62□□□□□ -1.83
VPS50-214ENST00000477935 STAMBPO95630 424 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 PNPP00491 289 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 SERPIND1P05546 499 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 ERCC1P07992 297 aaPredicted RBP3.62□□□□□ -1.83
VPS50-214ENST00000477935 MSMBP08118 114 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 LBPP18428 481 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 ADRA2CP18825 462 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 EPORP19235 508 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 PTNP21246 168 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 RPS3P23396 243 aaKnown RBP eCLIP3.62□□□□□ -1.83
VPS50-214ENST00000477935 CTNNA2P26232 953 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 DUTP33316 252 aaKnown RBP3.62□□□□□ -1.83
VPS50-214ENST00000477935 STXBP1P61764 594 aaKnown RBP3.62□□□□□ -1.83
VPS50-214ENST00000477935 PON3Q15166 354 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 SGCBQ16585 318 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 TAF9Q16594 264 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 FGD3Q5JSP0 725 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 FAM182AQ5T1J6 154 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 ZNF470Q6ECI4 717 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 ADNP2Q6IQ32 1131 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 ZNF774Q6NX45 483 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 FAHD2BQ6P2I3 314 aaPredicted RBP3.62□□□□□ -1.83
VPS50-214ENST00000477935 ANGPTL8Q6UXH0 198 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 SYT10Q6XYQ8 523 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 C9orf40Q8IXQ3 194 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 KRT222Q8N1A0 295 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 GABRG1Q8N1C3 465 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 ZNF321PQ8N8H1 164 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 CCDC63Q8NA47 563 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 OR51F2Q8NH61 342 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 FNDC9Q8TBE3 224 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 LKAAEAR1Q8TD35 194 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 P3H4Q92791 437 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 PEX13Q92968 403 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 ST6GALNAC6Q969X2 333 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 FAHD2AQ96GK7 314 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 TBL1YQ9BQ87 522 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 APOL2Q9BQE5 337 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 METTL7AQ9H8H3 244 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 GNB4Q9HAV0 340 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 GPN1Q9HCN4 374 aaPredicted RBP3.62□□□□□ -1.83
VPS50-214ENST00000477935 RAB9BQ9NP90 201 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 SPACA6W5XKT8 324 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 COL7A1Q02388 2944 aa3.62□□□□□ -1.83
VPS50-214ENST00000477935 C2orf92A0A1B0GVN3 265 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 GOLGA6L10A6NI86 522 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 A8MXK9 166 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 F8VVB4 439 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 F8VWA3 439 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 GOLGA6L19H0YKK7 550 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 ICOSLGO75144 302 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 GCM2O75603 506 aaPredicted RBP3.61□□□□□ -1.83
VPS50-214ENST00000477935 LY6HO94772 140 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 PROSCO94903 275 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 NXPH4O95158 308 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 LRATO95237 230 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 ETHE1O95571 254 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 GAS8O95995 478 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 GOT2P00505 430 aaKnown RBP3.61□□□□□ -1.83
VPS50-214ENST00000477935 QDPRP09417 244 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 PABPC4LP0CB38 370 aaKnown RBP3.61□□□□□ -1.83
VPS50-214ENST00000477935 IMPA1P29218 277 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 CAPGP40121 348 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 KLK7P49862 253 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 FBXW4P57775 412 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 SNRPD2P62316 118 aaKnown RBP3.61□□□□□ -1.83
VPS50-214ENST00000477935 BTN3A2P78410 334 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 RIGQ13278 110 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 POU6F1Q14863 301 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 MORF4L2Q15014 288 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 PPA1Q15181 289 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 TSC22D1Q15714 1073 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 DUSP5Q16690 384 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 KLHL38Q2WGJ6 581 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 TTLL9Q3SXZ7 439 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 C6orf136Q5SQH8 315 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 TIMM23BQ5SRD1 257 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 C1QTNF12Q5T7M4 302 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 LRRC38Q5VT99 294 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 ASPHD2Q6ICH7 369 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 CAVIN1Q6NZI2 390 aaKnown RBP3.61□□□□□ -1.83
VPS50-214ENST00000477935 TTC27Q6P3X3 843 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 ALKBH5Q6P6C2 394 aaKnown RBP3.61□□□□□ -1.83
VPS50-214ENST00000477935 NRARPQ7Z6K4 114 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 PLCZ1Q86YW0 608 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 BBOF1Q8ND07 529 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 OR10G7Q8NGN6 311 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 OR4F5Q8NH21 305 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 TMIGD2Q96BF3 282 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 LRRC58Q96CX6 371 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 NEDD4LQ96PU5 975 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 HBEGFQ99075 208 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 SLC6A7Q99884 636 aa3.61□□□□□ -1.83
VPS50-214ENST00000477935 PINK1Q9BXM7 581 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms