RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ZNF670-ZNF695F2Z2N8 137 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 J3QRE1 110 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 CXCL13O43927 109 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SLC16A7O60669 478 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 WDR1O75083 606 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SEC14L2O76054 403 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SERPINA3P01011 423 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 HLA-DQA2P01906 255 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 MT-ND5P03915 603 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 CD1AP06126 327 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SLC2A5P22732 501 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 LAP3P28838 519 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 C21orf33P30042 268 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-207ENST00000475558 DCTDP32321 178 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 CSNK1A1P48729 337 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 STARP49675 285 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 BIDP55957 195 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 WNT4P56705 351 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 CLDN17P56750 224 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 LSM6P62312 80 aaKnown RBP6.23□□□□□ -1.41
SHQ1-207ENST00000475558 MLLT11Q13015 90 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-207ENST00000475558 KCNMB1Q16558 191 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SMN1Q16637 294 aaKnown RBP6.23□□□□□ -1.41
SHQ1-207ENST00000475558 HIST3H3Q16695 136 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 MESTQ5EB52 335 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SLC18B1Q6NT16 456 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 AAED1Q7RTV5 226 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SYT9Q86SS6 491 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 CCDC36Q8IYA8 594 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 OR6V1Q8N148 313 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SDR9C7Q8NEX9 313 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 OR10H5Q8NGA6 315 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 OR52I1Q8NGK6 324 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 OR6N1Q8NGY5 312 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SNX33Q8WV41 574 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SMPDL3BQ92485 455 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 PHYHIPQ92561 330 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 THRSPQ92748 146 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 TMEM54Q969K7 222 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 C14orf79Q96F83 325 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 WDYHV1Q96HA8 205 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 GMPPAQ96IJ6 420 aaPredicted RBP6.23□□□□□ -1.41
SHQ1-207ENST00000475558 TAAR6Q96RI8 345 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SIGLEC11Q96RL6 698 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 MGLLQ99685 303 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 KLHDC3Q9BQ90 382 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SYT4Q9H2B2 425 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 TMEM185BQ9H7F4 350 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 NIPAL2Q9H841 368 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SP140LQ9H930 580 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 WDR76Q9H967 626 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 BCO1Q9HAY6 547 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 RPRD1BQ9NQG5 326 aaKnown RBP6.23□□□□□ -1.41
SHQ1-207ENST00000475558 GLTPQ9NZD2 209 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 KLHL13Q9P2N7 655 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 B3GAT1Q9P2W7 334 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 ADAM18Q9Y3Q7 739 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 COMMD3-BMI1R4GMX3 469 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 CACNA1CQ13936 2221 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 SCN2AQ99250 2005 aa6.23□□□□□ -1.41
SHQ1-207ENST00000475558 NF1P21359 2839 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 DPPA5A6NC42 116 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 CD8B2A6NJW9 211 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 ACOD1A6NK06 481 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 FAM183AA6NL82 134 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF716A6NP11 495 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SHISA8B8ZZ34 492 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 RPL36A-HNRNPH2H7BZ11 118 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 CCRL2O00421 344 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF593O00488 134 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-207ENST00000475558 TRAF3IP2O43734 574 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-207ENST00000475558 KRT33AO76009 404 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 ZNF432O94892 652 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SLC2A10O95528 541 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 PLGP00747 810 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-207ENST00000475558 MT-ND2P03891 347 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SCG5P05408 212 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SMIM18P0DKX4 95 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 PCMT1P22061 227 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 PTGS2P35354 604 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 GBX2P52951 348 aaPredicted RBP6.22□□□□□ -1.41
SHQ1-207ENST00000475558 CLDN20P56880 219 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 PCBD1P61457 104 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 TUBA1BP68363 451 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SRYQ05066 204 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 TPBGQ13641 420 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 PCK2Q16822 640 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 TIGD6Q17RP2 521 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 C10orf128Q5T292 105 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SLC25A47Q6Q0C1 308 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 PAMR1Q6UXH9 720 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 B3GNT6Q6ZMB0 384 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 TUBA1AQ71U36 451 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SSX8Q7RTT4 187 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 P4HA3Q7Z4N8 544 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 CDH24Q86UP0 819 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 IGFN1Q86VF2 1251 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 SIAH3Q8IW03 269 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 C20orf196Q8IYI0 205 aa6.22□□□□□ -1.41
SHQ1-207ENST00000475558 UBQLNLQ8IYU4 475 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms