RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 POLE4Q9NR33 117 aa14.05□□□□□ -0.16
SRM-204ENST00000475189 ZNF701Q9NV72 531 aaPredicted RBP14.05□□□□□ -0.16
SRM-204ENST00000475189 PDP1Q9P0J1 537 aaPredicted RBP14.05□□□□□ -0.16
SRM-204ENST00000475189 TEP1Q99973 2627 aaKnown RBP14.05□□□□□ -0.16
SRM-204ENST00000475189 MED13LQ71F56 2210 aa14.05□□□□□ -0.16
SRM-204ENST00000475189 HIVEP1P15822 2718 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 E2F6O75461 281 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 KHDRBS3O75525 346 aaKnown RBP14.04□□□□□ -0.16
SRM-204ENST00000475189 CIB2O75838 187 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 CST2P09228 141 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 ZNF32P17041 273 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 MSR1P21757 451 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 NOS3P29474 1203 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 GUCA1AP43080 201 aaPredicted RBP14.04□□□□□ -0.16
SRM-204ENST00000475189 PTH2RP49190 550 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 NKX6-1P78426 367 aaPredicted RBP14.04□□□□□ -0.16
SRM-204ENST00000475189 COX10Q12887 443 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 ENDOGQ14249 297 aaKnown RBP14.04□□□□□ -0.16
SRM-204ENST00000475189 SLC35F1Q5T1Q4 408 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 LEG1Q6P5S2 330 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 JAZF1Q86VZ6 243 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 KRTAP1-3Q8IUG1 177 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 HS3ST5Q8IZT8 346 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 NUP37Q8NFH4 326 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 PERPQ96FX8 193 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 DUS3LQ96G46 650 aaKnown RBP14.04□□□□□ -0.16
SRM-204ENST00000475189 FOXN4Q96NZ1 517 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 TSSK2Q96PF2 358 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 NMNAT3Q96T66 252 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 ZNF416Q9BWM5 594 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 TSSK6Q9BXA6 273 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 RERGLQ9H628 205 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 CCNB1IP1Q9NPC3 277 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 CA10Q9NS85 328 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 CBLN4Q9NTU7 201 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 TBC1D23Q9NUY8 699 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 ARMC1Q9NVT9 282 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 COA3Q9Y2R0 106 aaPredicted RBP14.04□□□□□ -0.16
SRM-204ENST00000475189 F8P00451 2351 aa14.04□□□□□ -0.16
SRM-204ENST00000475189 CELSR1Q9NYQ6 3014 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 DCTN6O00399 190 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 DEAF1O75398 565 aaPredicted RBP14.03□□□□□ -0.16
SRM-204ENST00000475189 SOX14O95416 240 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 RENP00797 406 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 PRKACGP22612 351 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 NR4A1P22736 598 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 CDKN1AP38936 164 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.03□□□□□ -0.16
SRM-204ENST00000475189 PABPC1L2AQ5JQF8 200 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 UGT2A3Q6UWM9 527 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 SLC30A7Q8NEW0 376 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 SDR9C7Q8NEX9 313 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 SRA1Q9HD15 236 aaKnown RBP14.03□□□□□ -0.16
SRM-204ENST00000475189 EMC7Q9NPA0 242 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.03□□□□□ -0.16
SRM-204ENST00000475189 REV1Q9UBZ9 1251 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 B9D1Q9UPM9 204 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 AP4S1Q9Y587 144 aa14.03□□□□□ -0.16
SRM-204ENST00000475189 IGLV1-36A0A0B4J1U3 117 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 IQCMA0A1B0GVH7 501 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 OR6C68A6NDL8 312 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 MPZL1O95297 269 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 PTHP01270 115 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 CCL2P13500 99 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 APEX1P27695 318 aaKnown RBP14.02□□□□□ -0.17
SRM-204ENST00000475189 CRABP1P29762 137 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 THBS4P35443 961 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 ADAM8P78325 824 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 PSG4Q00888 419 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 HSF2Q03933 536 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 PLP2Q04941 152 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 DBPQ10586 325 aaPredicted RBP14.02□□□□□ -0.17
SRM-204ENST00000475189 DAG1Q14118 895 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 ADIPOQQ15848 244 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 MST1LQ2TV78 715 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 ZNF362Q5T0B9 420 aaPredicted RBP14.02□□□□□ -0.17
SRM-204ENST00000475189 SHEQ5VZ18 495 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 KRT80Q6KB66 452 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 VHLLQ6RSH7 139 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 GLB1L2Q8IW92 636 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 OR6V1Q8N148 313 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 LNX2Q8N448 690 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 PAQR4Q8N4S7 273 aaPredicted RBP14.02□□□□□ -0.17
SRM-204ENST00000475189 NPEPL1Q8NDH3 523 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 CPEB3Q8NE35 698 aaKnown RBP14.02□□□□□ -0.17
SRM-204ENST00000475189 OR52E2Q8NGJ4 325 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 OR4Q3Q8NH05 313 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 NRBF2Q96F24 287 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 DDOQ99489 341 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 WNT5BQ9H1J7 359 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 C1orf198Q9H425 327 aa14.02□□□□□ -0.17
SRM-204ENST00000475189 ZNF469Q96JG9 3925 aaPredicted RBP14.02□□□□□ -0.17
SRM-204ENST00000475189 C12orf71A8MTZ7 269 aa14.01□□□□□ -0.17
SRM-204ENST00000475189 GPANK1O95872 356 aa14.01□□□□□ -0.17
SRM-204ENST00000475189 ANXA8P13928 327 aa14.01□□□□□ -0.17
SRM-204ENST00000475189 PCBD1P61457 104 aa14.01□□□□□ -0.17
SRM-204ENST00000475189 SNTB2Q13425 540 aaKnown RBP14.01□□□□□ -0.17
SRM-204ENST00000475189 ATP6AP1Q15904 470 aa14.01□□□□□ -0.17
SRM-204ENST00000475189 KCNMB1Q16558 191 aa14.01□□□□□ -0.17
SRM-204ENST00000475189 SWI5Q1ZZU3 235 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms