RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CD79AP11912 226 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 NR2C1P13056 603 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 NR4A1P22736 598 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 SERPINF1P36955 418 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 MAGEA2P43356 314 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 CAPZA2P47755 286 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 HMGA2P52926 109 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 FXYD6P3P58550 94 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 MYBPC1Q00872 1141 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 CHRNB3Q05901 458 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 PIGFQ07326 219 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 NPRL3Q12980 569 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 TNK1Q13470 666 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 CLEC12BQ2HXU8 276 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 MTX3Q5HYI7 312 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 THEM4Q5T1C6 240 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 SHISA2Q6UWI4 295 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 FOXL2NBQ6ZUU3 175 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 RRM2BQ7LG56 351 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 ZER1Q7Z7L7 766 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 ARIH2OSQ8N7S6 290 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 NABP1Q96AH0 204 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 TSPAN32Q96QS1 320 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 GPA33Q99795 319 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 MUC13Q9H3R2 512 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 PLK3Q9H4B4 646 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 SIAEQ9HAT2 523 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 NRIP3Q9NQ35 241 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 GFOD1Q9NXC2 390 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 TAS2R1Q9NYW7 299 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 CR1P17927 2039 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 NAV3Q8IVL0 2385 aa9.63□□□□□ -0.87
COL4A6-205ENST00000468338 TCRBV5S2A0A599 114 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 TMEM129A0AVI4 362 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 A6NIZ1 184 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 B9A039 149 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 AHCYL1O43865 530 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 SLC2A10O95528 541 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 OR4A8P0C604 315 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 NPR2P20594 1047 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 ATP6V1B2P21281 511 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 THBS4P35443 961 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 ACVR1BP36896 505 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 PTDSS1P48651 473 aaKnown RBP9.62□□□□□ -0.87
COL4A6-205ENST00000468338 ZNF84P51523 738 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 RIPPLY3P57055 190 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 SMIM11AP58511 58 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 RAP1BP61224 184 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 RAP1AP62834 184 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 MXRA7P84157 204 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 MS4A2Q01362 244 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 FMODQ06828 376 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 TRIM25Q14258 630 aaKnown RBP9.62□□□□□ -0.87
COL4A6-205ENST00000468338 RAB39AQ14964 217 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 FGD3Q5JSP0 725 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 FAM27BQ5VT28 67 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 LCN8Q6JVE9 175 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 RINLQ6ZS11 566 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 IGFN1Q86VF2 1251 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 CLDN22Q8N7P3 220 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 OR10H5Q8NGA6 315 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 FAM46AQ96IP4 442 aaKnown RBP9.62□□□□□ -0.87
COL4A6-205ENST00000468338 RBP7Q96R05 134 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 DOK1Q99704 481 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 SMR3AQ99954 134 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 SH3GL3Q99963 347 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 PRPF19Q9UMS4 504 aaKnown RBP9.62□□□□□ -0.87
COL4A6-205ENST00000468338 PMF1-BGLAPU3KQ54 211 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 HIVEP2P31629 2446 aa9.62□□□□□ -0.87
COL4A6-205ENST00000468338 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-205ENST00000468338 A0A096LNT2 108 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 FAM171A2A8MVW0 826 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 NDUFB2O95178 105 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 GADD45GO95257 159 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 SNAP29O95721 258 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 RAB36O95755 333 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 TXNDC12O95881 172 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 FABP3P05413 133 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 IGFBP1P08833 259 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-205ENST00000468338 APEHP13798 732 aaKnown RBP9.61□□□□□ -0.87
COL4A6-205ENST00000468338 GLRXP35754 106 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 ECI1P42126 302 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 EVX1P49640 407 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 EFNA4P52798 201 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 ERVK-25P63136 954 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 CD47Q08722 323 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 TOP3AQ13472 1001 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-205ENST00000468338 DAG1Q14118 895 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 RAB35Q15286 201 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 MSMPQ1L6U9 139 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 SLC36A2Q495M3 483 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 GPR139Q6DWJ6 353 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 SLC16A14Q7RTX9 510 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 TRPM8Q7Z2W7 1104 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 OR52J3Q8NH60 311 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 BCAS4Q8TDM0 211 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 HTRA1Q92743 480 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 MCUR1Q96AQ8 359 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 FBXO17Q96EF6 278 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 Q96M85 177 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms