RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 BCL2L14Q9BZR8 327 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 NUAK2Q9H093 628 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SYT4Q9H2B2 425 aa7.37□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF275Q9NSD4 429 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 SIRT4Q9Y6E7 314 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-208ENST00000468300 PGPEP1LA6NFU8 196 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF891A8MT65 544 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-208ENST00000468300 TNFSF11O14788 317 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 GLCEO94923 617 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 MAGEA5P43359 124 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 STARP49675 285 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 PPP5CP53041 499 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 HSF1Q00613 529 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 TLE3Q04726 772 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 MFSD13AQ14CX5 517 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 MED22Q15528 200 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 DEFB109BQ30KR1 87 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 SOWAHCQ53LP3 525 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-208ENST00000468300 SLC25A25Q6KCM7 469 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 TMEM251Q8N6I4 163 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 RNF167Q9H6Y7 350 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 FAIMQ9NVQ4 179 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 TNFRSF10DQ9UBN6 386 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ING1Q9UK53 422 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-208ENST00000468300 KLHDC2Q9Y2U9 406 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 EXOSC1Q9Y3B2 195 aaKnown RBP7.36□□□□□ -1.23
BRCA1-208ENST00000468300 DBX1A6NMT0 343 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 C12orf71A8MTZ7 269 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 NDUFS8O00217 210 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 NUPL2O15504 423 aaKnown RBP7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ARHGEF9O43307 516 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 CTLA4P16410 223 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 CD36P16671 472 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 MEOX1P50221 254 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 LHX2P50458 406 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 AGFG1P52594 562 aaKnown RBP7.36□□□□□ -1.23
BRCA1-208ENST00000468300 WNT4P56705 351 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ACSM1Q08AH1 577 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 HIST3H3Q16695 136 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF322Q6U7Q0 402 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ZIC4Q8N9L1 334 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF511Q8NB15 262 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 PPP1R35Q8TAP8 253 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 DTD1Q8TEA8 209 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ITPKCQ96DU7 683 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 ALG12Q9BV10 488 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 MRPL22Q9NWU5 206 aaKnown RBP7.36□□□□□ -1.23
BRCA1-208ENST00000468300 GAB2Q9UQC2 676 aa7.36□□□□□ -1.23
BRCA1-208ENST00000468300 IGHV3-15A0A0B4J1V0 119 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 IRGMA1A4Y4 181 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 E9PI62 339 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 MAGEB4O15481 346 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 SERPINI2O75830 405 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 RBBP9O75884 186 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 BCL10O95999 233 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 PDGFAP04085 211 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 CPEP16870 476 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 PAICSP22234 425 aaKnown RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 GADD45AP24522 165 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 GDF1P27539 372 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 CASRP41180 1078 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 CRYBB2P43320 205 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 OR2B6P58173 313 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 POU3F1Q03052 451 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 TSTQ16762 297 aaKnown RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 OTPQ5XKR4 325 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 MTFR2Q6P444 385 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 SLC35D2Q76EJ3 337 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ADCK1Q86TW2 530 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 PRR18Q8N4B5 295 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 OR14L1PQ8NHC6 308 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 SNIP1Q8TAD8 396 aaKnown RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 SPRYD4Q8WW59 207 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 DCLRE1CQ96SD1 692 aaKnown RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 TBX5Q99593 518 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 WDR76Q9H967 626 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 H2AFY2Q9P0M6 372 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 BOKQ9UMX3 212 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 B9D1Q9UPM9 204 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ERGIC3Q9Y282 383 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 LIPGQ9Y5X9 500 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 SPIN1Q9Y657 262 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ZZEF1O43149 2961 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 K7EM74 188 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 SULT2B1O00204 365 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ITGB2P05107 769 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 PGA4P0DJD7 388 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 PGA3P0DJD8 388 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 GALP22466 123 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 CLDN18P56856 261 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 FMODQ06828 376 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 MLLT11Q13015 90 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-208ENST00000468300 OR52N1Q8NH53 320 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 NDNFQ8TB73 568 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 KCNE4Q8WWG9 221 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 KLHL15Q96M94 604 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 EMC6Q9BV81 110 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 OR51E2Q9H255 320 aa7.35□□□□□ -1.23
BRCA1-208ENST00000468300 ISYNA1Q9NPH2 558 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms